KEGG   Aeromonas hydrophila pc104A: V429_21955
Entry
V429_21955        CDS       T03193                                 

Definition
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
ahp  Aeromonas hydrophila pc104A
Pathway
ahp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    V429_21955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahp03400]
    V429_21955
Enzymes [BR:ahp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     V429_21955
DNA repair and recombination proteins [BR:ahp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     V429_21955
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AHX71373
LinkDB
Position
complement(4727957..4731307)
AA seq 1116 aa
MFTLYHSNQLDLLKELLVSRIRQAPLSHPFEREQILVQSPGMAQWLKLELAKAFGIAANI
DFPLPASFIWEMFTQVLADVPRQSPYNKGSMSWQLMTILPALLDRPAFAPLAAYLGGDDA
DPAKDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEQGEGLSQELAGVSGQDWQPELWR
ELVARTLALSPSGYHRANLYEEFIHELQRTATLPGKLPQRVFVFGISALPPRYVEALLAL
GSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLKPGTDIDTLQGPANPLLASMGKLG
RDYLHQLMELEVPQIEAFVDIDELDGKGNIKLLQAIQKDVLELAERGAGQFDLDASHHKS
PLDPADGSLQIHACHGPMRELEVLHDRLLALFEQDSSLTPKDVVVMMPDVNSYGPYIQAV
FGARGQIPFAVSDRAASQESPLLQSFLALLRLPNARFGAGELLAILEVPAVLRRFELDDE
EFNQLRVWVQETGIRWGLDDGYPERFDLPRLSGNSWLFGLRRMLLGFAMGDGEPVAGILP
YADIEGQQGLALGKLAWFVDSLAEFLPRLQQAQPLGEWVACLNALLERFYLADEDEERQL
QLIRSQLADWLAQLGEARFEQPISADLLQDYLGSVLGESRSSQRFLAGQVNFCTLMPMRS
IPFKQVCLLGMNDGVYPRTLPPMGFDLMAVAGRRGDRSRRDDDRYLFLEALLSAQQGLYI
SYQGFSAQDNSDKVPSVLLAELIDYVRQGFVLAGDEQLDDESSGKRLLAHLITQHPLTPY
SHAYFYPTAGSGLFTYAADWLPALHPQRGAANFQSGELPLPPEWGKEQGLELAELLRFYR
QPARYFLNRRLKVWFELNEANIEESEPFELDGLQHYQLKDLLLDAHLAQGDSAMRRERLQ
LTGLLPQGWFGSLLLEDLDEQMGKLAERLRPWVAANEAEKQAVEVDIALAQGQLQGWIDT
QKGRLLVVKPGSFNGKDLLLGWIQHLCLSLSDAPGDTLLFDAKQSLRLARLPADEARPKL
AALVALWMQGMKRPLPFFPSTAWDWLKAIEKDPEKPEAADKAAFTRFNGGYMAKGEGEDA
YVARCFPELDEAVLAQLQALAREHLTPLLKSLEELQ
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgtttaccctctaccactccaatcagctggatctgctcaaagagctgctggtgagccgc
atccggcaggcccctctctctcaccccttcgagcgcgagcaaattctggtgcagagcccg
ggcatggcccagtggctcaagctggagctggccaaagccttcggcattgccgccaatatc
gactttccgctgcccgccagctttatctgggagatgttcacccaggtactggcggacgtg
ccgcgccagagcccctacaacaagggctccatgagctggcagctgatgaccattctgccc
gccctgctcgatcgcccggcctttgcgccactggccgcctatctgggcggggatgacgcg
gatcctgccaaggatcccgagcaggtgcggctgtggcagctctgccagaaggtagcggat
ctgttcgaccagtatctggtctaccggccggactggatcgcccgctgggaacagggggag
gggttgagccaggagctggccggagtgagcggtcaggattggcagccggagctgtggcgc
gagctggtggcccgcacgttggcgctctctccaagcggctaccaccgtgccaacctctac
gaggagttcatccacgagctgcagcgtaccgccacgctgccgggcaagctaccgcagcgg
gtgttcgtattcggcatctcggcgctgccgccacgctatgtggaggcgctgctggccctc
ggcagccggccggaggtggaggtgcacctgttcgtcaccaacccctgccgctactactgg
ggcgacctgcttgatcgcaagaccctggcgcgcctcgagaacaagctcaagcccggcacc
gacatcgatactctgcaggggcccgccaacccgctgctcgcctccatgggtaagctgggg
cgcgactacctgcaccagctgatggaattggaggtgcctcaaatcgaggccttcgtcgat
atcgacgagctggatggcaagggtaacatcaagctgctgcaggccatccagaaggatgtg
ctggagctggcagaacggggcgccggccagttcgatctcgacgccagccaccacaagagc
ccgctcgatccggcggatggatccctgcagatccacgcctgccacggcccgatgcgtgaa
ctcgaggtgctgcacgaccggctgctggcgctgttcgagcaggacagctccctcaccccg
aaagacgtggtggtgatgatgccggacgtgaacagctacggcccctacattcaggcggtg
tttggcgcgcgcggtcagatccccttcgcggtatcggatcgggcggccagccaggagagc
ccgctgctgcagagtttcctcgccctgctcaggctgcccaacgcccgcttcggggcgggc
gagctgctcgccattctcgaggtgcccgccgtgctgcgccgcttcgagctggatgacgag
gagttcaaccagctgcgggtctgggtgcaggagaccggcatccgctgggggctggatgac
ggctaccccgagcgcttcgatctgccgcgcctctctggcaacagctggctgttcggtctg
cgtcgcatgctgctcggctttgccatgggcgacggcgaaccggtggccggcattctgccc
tacgcagacatcgagggtcagcaggggttggcgctcggcaagctcgcctggttcgtcgac
tcgctggccgaattcttgccccgcctgcaacaggcgcagccgctgggggagtgggtcgcc
tgcctcaacgcactgctggagcgcttctatctggccgacgaggatgaagagcgccagctg
cagcttattcgcagccagctggccgactggctcgcccagcttggtgaggcccgcttcgag
cagcccatcagtgccgacctgttgcaggattacctcggcagcgtgctgggggagtcccgc
tccagccagcgcttcctcgccggtcaggtcaacttctgtaccctgatgccgatgcgctcc
atccccttcaagcaggtctgcctgctcggcatgaacgacggcgtctacccgcgcaccctg
ccacccatggggtttgacctgatggcggtggcgggccggcggggggatcgctcccgtcgt
gatgacgaccgctacctgttcctcgaggcgctgctcagcgcccagcaggggctctacatc
agctatcagggtttcagcgcccaggacaacagcgacaaggtgccctcggtgctgctggcc
gaactcatcgactatgtgcgacagggcttcgtgctggcgggagatgagcagctcgatgac
gagagctccggcaagcgactgctggcgcacctgatcacccagcatccgctcaccccctac
agccacgcctacttctatccgacggcgggttccggcctctttacctatgccgccgactgg
ctgccggccctccatccgcagcgcggcgcagccaacttccagagtggcgagctgccgctc
cctcccgaatggggcaaggagcaggggctggagctggctgagctgctgcgcttctatcgc
cagcccgcccgctacttcctcaaccgccgccttaaggtgtggtttgagctgaacgaagcc
aacatcgaggagagcgaaccgttcgagctggacggtctgcaacattatcagctgaaagac
ctgctgctcgatgctcacctggcacagggggacagtgccatgcgccgcgagcggctgcag
ctcaccggcctgctgccgcaagggtggttcggcagcctgctgctggaggatctggacgag
cagatgggcaagctggcggagcggctgcggccctgggtggcggccaatgaggcagaaaaa
caggcggtggaggtcgatatcgcgctggcccagggtcagctgcaagggtggatcgacacc
cagaagggacgcttgctggtggtcaagcccggcagcttcaacggcaaggatctgttgctg
ggctggatccagcacctctgcctctccttaagcgacgcccccggcgacaccctgctgttc
gacgccaagcagagtctgcggctggccaggctcccggccgatgaggcgcggcccaagctg
gcggcgctggtggcgctctggatgcaggggatgaagcggccgctgcccttcttcccgagc
accgcctgggactggctcaaggcgatcgagaaggatccggagaaaccggaggcggccgac
aaggcggctttcacccgcttcaacggcggctacatggccaagggggagggggaagacgct
tatgtcgcccgctgtttcccggaactcgacgaggccgtgctggcccagttgcaggcactg
gcccgtgaacacttgaccccgctgctcaagagcctggaggagttgcaataa

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