Aeromonas hydrophila subsp. hydrophila AL09-71: V428_12690
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Entry
V428_12690 CDS
T03192
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahr03021
]
V428_12690
Transcription machinery [BR:
ahr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V428_12690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_10
GerE
Motif
Other DBs
NCBI-ProteinID:
AHX32910
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Position
2746856..2747446
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AA seq
196 aa
AA seq
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MALGFFRKKGATVGKDPTTSPVYGGMADKQTKYEALVHALHGDIYRYAYWLCRDPQVAED
LVQETFLRAWKSIDSLLDDKAAKAWLITILRRENARRFERKQFDLVDLDEHPQSDPEALH
SEQEMENEWLRRHIARLPAEYQEPLLLQVLGGFSGDEIAAQLGLNKNTVMTRLFRARNQI
KEAMESTTQQRGHTNG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggctttaggttttttcagaaaaaaaggtgccactgtcggaaaggatcccacgacctcc
ccggtctatggaggcatggcagacaaacaaaccaaatacgaagccttggtacatgccctg
cacggggacatctaccgctacgcctactggctgtgccgggatccgcaagtggcggaagat
ctggtgcaggagacctttctgcgcgcctggaagagcatcgactccctgctcgacgacaag
gccgccaaggcctggctcatcaccatactgcggcgggaaaatgcacgccggttcgagcgc
aagcagtttgacctcgtcgatctcgacgagcatccccagagcgatccggaggcactgcac
agcgagcaggagatggagaacgagtggctcagacgccacatcgcccgcctgccggccgaa
tatcaggaacccctgctgctgcaggtgctggggggctttagcggcgacgagatcgccgca
cagctggggctcaacaagaacaccgtcatgactcgcctgtttcgggcccgcaaccagata
aaagaggccatggagtcaacgacccaacagagaggacacaccaatggatga
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