Aeromonas hydrophila subsp. hydrophila AL09-71: V428_19440
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Entry
V428_19440 CDS
T03192
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahr03016
]
V428_19440
Enzymes [BR:
ahr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
V428_19440
Transfer RNA biogenesis [BR:
ahr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
V428_19440
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHX34124
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All DBs
Position
4248123..4248650
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AA seq
175 aa
AA seq
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MAKLFFALPAEALAPDLVAWRDQLPWPGQPVPAANLHLTLAFLGEADQLTTTRLMAAVAR
QHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHV
TLSRKASEPPAALPAPDFVLQADRFCLYQSLSTPDGVRYEPLACWPLRAREKMAS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactcttctttgccctgcccgccgaggcgctggcacccgatctcgttgcctgg
cgcgaccagctgccctggccgggtcaaccggtgcccgccgccaatctccacctgacgctg
gcctttctcggcgaagcggatcagctcaccaccacccgcctgatggccgctgttgcgcgc
cagcactgcccgccgctcaccatagcgctcaatgaaaccggctggttcggccgcgccaag
gctgcctgggttggcccgacggagtggcccaacgagctcaccgtgctggccagggcgctg
cgtcgccacggcgagaagctggggcttggcaacggcgagcagggctatcgcccccacgtc
accttgtcgcgcaaggcgagcgaaccgccggccgccttgcccgcccccgatttcgtgctg
caggccgatcgcttctgcctctatcaatccctctccaccccggacggggtgcgctacgag
cccctcgcctgctggccgctgcgggccagagagaaaatggcatcctga
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