KEGG   Aeromonas hydrophila ML09-119: AHML_02835Help
Entry
AHML_02835        CDS       T02683                                 

Definition
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
ahy  Aeromonas hydrophila ML09-119
Brite
KEGG Orthology (KO) [BR:ahy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ahy03016]
    AHML_02835
Enzymes [BR:ahy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AHML_02835
Transfer RNA biogenesis [BR:ahy03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AHML_02835
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: RNB OB_RNB CSD2 S1
Motif
Other DBs
NCBI-ProteinID: AGM42352
LinkDB All DBs
Position
complement(623555..625576)
Genome map
AA seq 673 aa AA seqDB search
MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEITQKIASQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRTDLTATPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARISSHARLTYDDVSDWAEHGKELAIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKQVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLRENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPVAPTSE
ADAAPADEAPKAE
NT seq 2022 nt NT seq  +upstreamnt  +downstreamnt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgttatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgccgccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgtaccgaaaaagagaaggaagtggccgaaccggatgccctgctggag
cagtccgtcacccgtttcgtggcccgcgtcaagatgttccgcgaccgcctcaacgtggtc
gccgatcacccgctgatcaaggatgccatcaaggcccgcgtcaagaagggtctggacgag
aaagagttcaaggaaggggactgggtggttgccaccctcaagcgtcacgccctggtggac
ggcaacttctctgccgagatcacccagaagatcgcctcgcaggaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccaggttgaaccggctgatttgccggag
tggaaggtgatcgaagaggaagagctgccgcgcaccgatctgaccgcgacccccttcttc
accatcgacggtgccaagaccaaggacatggacgatgccctggccatccgcaagctggac
aacggctgggagctgctggtggccatcgccgacccgaccgcttacgtggccgagggtagc
gagctggacaaggaagccgcccagcgcgccttcaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaggagggcgaggagcgc
aacaccctgtgcgcccgtctgctcatcgccgaggatggcctgctgctggaagagaccgag
ttcttcgcagcccgcatcagctcccacgcccgtctcacctatgacgacgtctccgactgg
gcggagcacggcaaagagctggccatcgacgccggcgtgctggcccagctgccgctgatg
aaggcgatgacagaggcgcgcattgcctggcgcaccgaacatgccctggtgttcccggac
agacccgactacgacttcgagctgggcgagaacggcgaagtgctggccattcacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggccgcgtgctcggcaagcaggtcggctacggcatcttcaacgtccacaccggctttgac
gaagaatccctcgacggcgccatcgatctgctgaaaagcgccgaggccccgtttgagaaa
gaagagatcgccagcctctccggcttctgtgccctgcgtcgctggatcgacaacctggat
acccgctggctggacggcaagatccgccgcttccagagctatgcgctgatgtccgccgag
ccgggcgcccactacggcctggggctggatgcctacgccacctggacctcaccgatccgc
aagtacggcgacatggtcaaccatcgcctgctgaaggccgtcatcgccggcaagaccccg
ggtgagcgcccgagcctggaactcaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgctacctcaaggccgatgccggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgt
ctgcgcgagaacggcgctgtggtgttcatgcccgcccgccatatcctggacaacaaggat
cggctggagtgcaactgggacaatggtcgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtcaagctgaccgaagcggtggaagagacccgctccctc
atcgccaagccggcggtggagctggtgccgggcccggcgccggtcgccccgaccagcgaa
gccgatgccgcgcctgccgacgaggcccccaaggccgaataa

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