Pseudalgibacter alginicilyticus: APS56_13260
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Entry
APS56_13260 CDS
T04100
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ahz
Pseudalgibacter alginicilyticus
Pathway
ahz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APS56_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahz03400
]
APS56_13260
DNA repair and recombination proteins [BR:
ahz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
APS56_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
DUF5881
AAA_14
Med15_M
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ALJ06040
UniProt:
A0A0P0DDC8
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Position
3198124..3200736
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AA seq
870 aa
AA seq
DB search
MASKNKKETPLMKQYNAIKAKYPDALLLFRVGDFYETFGEDAVKTAGILGIILTKRGAGS
ESEIELAGFPHHSINTYLPKLVKAGQRVAICDQLEDPKQTKTIVKRGVTELVTPGVALND
EVLVSKSNNFLCSVYFDKSYIGISFLDISTGEFLTSQGNAEYIDKLLQNFNPSEVLVSKK
KRSFFNETFGHDFHTFYLEDWVYQTDYAYETLIKHFNTKTLKGFGVEDLHEGIVASGAIL
HYLGETQHHKLQHITSIIRIAEDDYVWMDKFTIRNLELYNSTNNNAVTLLNVIDKTISPM
GGRLLKRWLALPLKNVDKIKQRHEVVSFLTTESSILQKVQNHVKQIGDLERLISKIATGK
VNPREVIQLKNSLEAIVPIKALASNCTNESLKIIGDTLQSCEVLREKIKETLNEDAPVNV
LKGNSIAVGFSSELDELRNLSKSGKDYLDSMLERESERTGITSLKIASNNVFGYYIEVRN
THKDKVPEEWIRKQTLVNAERYITEELKEYEAKILGAEDRIQAIEQQLFTELVGWMGQYI
KPVQQNAYLIGQIDCLCGFAQLAKDNQYIYPVIDKSYDLEIKEGRHPVIEKQLPIGDVYI
ANDVFLDRTTQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAESARIGLVDKIFTR
VGASDNISMGESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAISEYLH
EHPAKPKTLFATHYHELNEMTETFGRIKNFNVSVKELKDHVLFLRKLVEGGSAHSFGIHV
AKMAGMPQQVLHRANAILKKLEQSHSSEELTDKVKLMQDDIQLSFFNLDDPLLENIKDEI
LHTDIDTLTPVEALMKLNEIKRMLVKKKQA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
ttggcatctaaaaacaaaaaagaaaccccgttaatgaaacaatacaatgctattaaagca
aagtatcctgatgcattattgttgtttcgggtgggcgatttttatgaaacttttggtgaa
gatgcggttaaaacagcaggtattttaggtattattttaaccaagcgtggagcaggaagt
gaaagtgaaatagagttggctgggtttccacaccattctataaatacctatttaccaaaa
ctagttaaagccgggcaacgggtagcgatttgtgaccagttggaagatcctaagcaaact
aaaactatagtcaaacgcggtgtaactgaattggtaacaccaggtgtagcactaaatgat
gaggttttagtgtctaaatcaaataactttttatgctctgtatattttgataaaagttat
ataggtatttcttttttagatatttctacaggtgaatttttaacatctcagggcaatgca
gagtatattgataaattgcttcaaaattttaatccgagtgaagtattggtttcaaaaaag
aaacgcagcttttttaatgaaacttttggacatgattttcatacgttttatttagaggat
tgggtttatcaaaccgattatgcttatgaaacgcttattaagcattttaataccaaaaca
cttaaaggttttggggttgaagacttgcatgaggggattgttgcttcaggggctattttg
cattatttaggtgaaacacagcaccataaattacaacatattacatcaattataagaatt
gcagaagatgattatgtgtggatggataaatttaccattagaaatttagagctttataat
tctactaataataatgccgtaacacttttaaatgttattgataaaaccatttcacctatg
ggtggaagattactcaagcgctggttggcattgcctttaaaaaacgttgataaaattaaa
caacgccatgaggtagttagttttttaacaacagaatcttccatacttcaaaaagttcaa
aatcatgtaaaacaaattggcgatttagagcgtcttatttcaaagatagccaccgggaaa
gtgaatccccgcgaagttattcagcttaaaaactcgttagaagccattgtgcctattaaa
gccttggcgtcaaattgtactaatgagtcgcttaaaattataggtgatacacttcaaagc
tgtgaagtgcttcgtgaaaaaataaaagagactttaaatgaagatgcccctgtaaatgtc
ttgaaaggaaatagtattgcggttggtttttcttcagaattggatgagttaagaaacttg
tctaaatcaggtaaggattatttagacagcatgttagaacgcgaaagtgagcgcactggt
ataacatcgcttaaaatagcgtcaaacaatgtttttggatattatattgaagtgcgaaac
acacataaagataaagttcctgaagaatggataagaaagcaaactttggttaacgcagag
cggtatattactgaagaacttaaagaatatgaagctaaaattttaggcgctgaagataga
attcaagctattgagcagcagttgtttactgaattagtggggtggatggggcaatatata
aaacccgtgcaacaaaatgcttatttgattgggcaaattgattgtttatgtgggtttgct
cagttggccaaagataatcaatacatatacccagtcatagataaatcatatgatttagag
attaaagagggacgtcatccagttatagaaaaacaattaccaattggtgatgtttatata
gctaatgatgtgtttttagatagaacaactcaacaaattattatgattacgggacctaat
atgtctggtaagtcagctattttacgtcaaacggctttaattgtactattggctcaaata
ggaagcttcgttcctgcggagtctgctcgtattggtttggtggataaaatatttacgaga
gtgggtgccagtgataatatttctatgggtgaatctacctttatggtagaaatgaatgaa
acagcttcaatcttgaataatatttctgatagaagtttggtgttgcttgatgaaataggt
cgtggtaccagtacttatgatggtatttctattgcttgggctattagtgaatatctgcat
gaacatcctgcaaaaccaaaaactctatttgcaacccattaccatgaattaaatgaaatg
actgaaacttttggacgtattaaaaatttcaatgtttccgttaaagaattaaaagatcat
gtactttttttaagaaaattggttgaaggtggtagtgcacatagttttggtattcatgtg
gcaaaaatggcgggtatgccacagcaagttttgcatcgtgccaatgccattttgaagaaa
ttagaacaatctcattctagtgaagagcttactgataaggtgaaattgatgcaagacgac
atacagttgagtttttttaatttagatgaccctttattagaaaatattaaagatgaaatt
ttacatactgatattgatacacttacgccagtagaagcgcttatgaaattgaatgaaatt
aagcgtatgttggtaaagaaaaagcaagcttaa
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