Anaerobacillus isosaccharinicus: AWH56_020940
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Entry
AWH56_020940 CDS
T06884
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aia
Anaerobacillus isosaccharinicus
Pathway
aia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWH56_020940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aia03019
]
AWH56_020940
03009 Ribosome biogenesis [BR:
aia03009
]
AWH56_020940
Enzymes [BR:
aia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWH56_020940
Messenger RNA biogenesis [BR:
aia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWH56_020940
Ribosome biogenesis [BR:
aia03009
]
Prokaryotic type
rRNA helicases
AWH56_020940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QOY35142
UniProt:
A0A7S7L684
LinkDB
All DBs
Position
complement(4116580..4118025)
Genome browser
AA seq
481 aa
AA seq
DB search
MNERNFEAFNLSDEISRALGVLKYKTPTEVQSVVIPRAMESQDLVVTSQTGSGKTAAFGL
PICEKIQWEEKLPQALILTPTRELAVQVRDDMTNFGRFKRIKAVALYGKEPFAKQKEELT
QKTHVVVGTPGRVLDHLERDTLVLDDIKYLILDEADEMLNMGFITKVEKIIKKLPSDRVT
MVFSATMPNKVETLCQKYMNNPMNIEIDTTGNTTSATEHRVIELEEAGKIAILKSLTVVE
NPDSCIIFCKTKEHVETVFNELEQANYSCEKLHGGLEQDDRFAVMDGFKMGNFRYLIATD
VAARGIDIDNVTLIINYDVPLEKESYVHRTGRTGRAGNKGKAITFATPYEEKFLRAIERY
IGFEIPRMEIPKHHEVAKAKAAFDEKISGRRVVRNNKTARINQDIMKLHFSGGKKKKIRA
VDFVGTIAKIPGVTAEDIGIITIQDNLSYVDILNGKGSVVLQAMENTTIKGKKLKVSEAI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacgtaattttgaagcatttaatttaagtgatgagataagtcgagctttaggc
gtgttaaagtacaaaacacctacagaagttcaaagtgtagtaataccaagagcgatggaa
tctcaagatctagttgtcacatctcaaactggaagtggaaagacagcggcttttgggcta
ccgatttgtgagaaaatccaatgggaagaaaaattaccgcaagctctaatccttacacca
actcgtgagcttgctgtccaagttcgtgatgacatgacaaattttggaagatttaaacgt
attaaagcggttgccctatacggtaaagagccttttgcgaaacaaaaagaagaattaaca
caaaaaactcatgtcgttgttggtacaccaggtcgagttctggaccatcttgaaagagat
acactcgttttagatgatattaagtacttaattttagatgaagctgatgaaatgttaaat
atgggctttatcacaaaagttgaaaagatcatcaaaaagcttccaagcgacagagttact
atggttttttctgctacaatgcctaataaggtcgaaactctttgtcaaaaatatatgaat
aatcctatgaatattgaaattgatactaccgggaacacaacgagtgcgactgagcataga
gttattgaattagaagaagcaggcaagatagcaatacttaaaagtctaactgttgttgaa
aatccagatagttgtatcatcttttgcaaaacgaaagaacatgttgagactgtttttaac
gagttagaacaagcgaactattcttgtgaaaaacttcatggaggactagaacaagacgac
cgttttgctgtgatggacggcttcaaaatgggaaatttccgctacctgatcgcaacagac
gtggcagctagaggaattgacatagataatgttacgttaattattaactacgacgttcca
ttggaaaaggaaagttatgttcatcgtacaggtagaacagggcgtgcaggtaataaaggg
aaagcaattacatttgcgacaccttatgaagagaaatttctaagagcaattgaaaggtac
attggatttgagatcccgagaatggagatccctaaacaccatgaagttgctaaagcaaaa
gctgcttttgatgaaaagataagtggtcgaagagttgtcagaaataataaaaccgcacga
attaaccaagacatcatgaaacttcattttagtggtggaaaaaagaagaagatccgggca
gtagattttgtcggaacaattgcgaaaattcctggagtaacagctgaagatattgggatc
atcacgatccaggataacttatcttacgttgacatcctaaatggaaaagggtcagtagtt
ctacaggccatggaaaacacaacaattaaaggtaagaagctgaaggtgagcgaagcaata
aaataa
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