Arachis ipaensis: 107625078
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Entry
107625078 CDS
T04301
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aip03016
]
107625078
Enzymes [BR:
aip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
107625078
Transfer RNA biogenesis [BR:
aip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107625078
Prokaryotic type
107625078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
107625078
NCBI-ProteinID:
XP_016183131
LinkDB
All DBs
Position
B02:14806139..14810080
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AA seq
509 aa
AA seq
DB search
MILYGACSYNLVPTRVTLTENMIPSFAQMVSSSSSSLLVPLSKFSCFCCSSAETSTISLP
KWEPFLKKKVVMRVGYVGTDYRGLQMQRDQHDLSTIEKELETAIFKAGGIQDSNFGDLDK
VKWSRSSRTDKGVHSLATMISFKMEIPDSAWKEDNDGISLANCINSYLPPTIRVFSILPS
KKRFDPRRECNLRKYSYLLPADIIGIQSHFSQDEIDSHISEFNSILNVFEGEHPFHNYTV
RSKYRKTYHKRRADGKGSASNRTRLSSLESESEESDVDDILSGNTTSLSDKEQRHKSSES
TESSGSSDQHSLIGVHARWLYEPDETDRLSGSHFRKIFRCSCGKLETSLGYNYVELDIWG
ESFMLHQIRKMVGTAVAVKRNLIPRDILSLSLVKFSRIVLPLAPPEVLILKGNAFSMRAS
AGSLTRPEMVSIVESEQILKAVDEFYVSVMLPQVSKFLDSSKPPWKLWVEKLDKYTSIPE
AQLDEVRKAWRTWKENFRIKLASDSDPDQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtatggtgcgtgttcgtataatcttgttccaacacgtgtcactctaacagag
aacatgataccaagttttgcacaaatggtgtcttcttcttcttcttctctgctagttcca
ctatccaaattcagctgcttctgttgttcttccgccgaaacttcaaccatttcccttcca
aagtgggaaccttttctcaagaaaaaggttgtcatgagagtcggttatgttggcactgac
tatagaggtttgcaaatgcaacgagatcagcatgacttatcaacgatcgagaaagaactc
gaaactgctatcttcaaggccggtggcatccaagatagtaatttcggagacttggacaaa
gttaaatggagccgaagtagcagaactgataaaggagttcattctttagcaacaatgata
tcctttaagatggaaattccggatagtgcatggaaagaagacaatgatggaatctccctt
gcgaactgcattaactcttaccttcctcctacaatccgagttttcagcatattgccttct
aaaaagagatttgaccccagaagagagtgcaatctgcggaaatattcttacctcctccct
gctgatattatagggatccagagccatttcagtcaggatgaaattgattcccatatttcg
gagttcaatagtatacttaatgtttttgagggagaacatcctttccataattatactgta
cggtctaagtacaggaaaacttaccataaaaggcgagccgatggaaaaggcagcgcgtcg
aacagaacaagattgtctagtttggaatctgagagtgaggaaagtgatgttgatgatatt
ctgagtggtaacacaactagtttaagcgacaaggaacagagacacaagtcttcggagtct
actgaatctagcggttcgagtgatcaacactcactcataggcgttcatgcacgatggtta
tatgaacctgacgagacagatagattaagcggttctcatttcagaaagattttccgttgc
tcttgtgggaagttggaaacatcacttggatataattacgtagagctcgatatatggggg
gagtccttcatgcttcatcaaatacgcaaaatggttgggactgctgtggcagttaagcgc
aatttaatcccaagagacatcctttctttgtcactcgtcaagttttcgcgaatcgtcctc
ccccttgccccgccagaagttttgatcttgaagggaaatgctttcagcatgagagcaagt
gccgggagtttaacaaggcctgagatggtgtctatcgtcgaatcagaacaaattctgaaa
gcagtggacgagttctacgtgtctgttatgttgcctcaagtttccaagttcctagattcg
tcaaagcctccatggaagctttgggttgagaaattggacaagtatacaagcattccagaa
gctcaattggatgaagttagaaaggcttggagaacttggaaagaaaactttagaataaaa
ctagcatcagattcggatccggatcaatag
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