KEGG   Achromobacter insolitus: BUW96_27850Help
Entry
BUW96_27850       CDS       T04671                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ais  Achromobacter insolitus
Pathway
ais03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ais00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BUW96_27850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ais03400]
    BUW96_27850
Enzymes [BR:ais01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BUW96_27850
DNA repair and recombination proteins [BR:ais03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BUW96_27850
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: APX78260
LinkDB All DBs
Position
6036619..6039141
Genome map
AA seq 840 aa AA seqDB search
MVDSLKKYREKRNFSVTPEPAGGGESGDAGLVFVIQKHWASRLHYDFRLELDGAMKSWAV
PKGPSFDPSIKRMAVQVEDHPIAYNQFEGTIPKGQYGAGKVIIWDEGRWTPIGDPRKGYK
AGHLKFTLDGVKLRGRWALIRMKGKESDRQPPWLLIKESDEYARPDQDFSVVDELPDSVV
PLRAKNTGTRAPGKPKTRSSQKVESVAALPGKAAALPAALKPQLATLVEGAPRGGEDWSY
EMKFDGYRILARIEDGKAALFTRNGHDWTAKMPRLAQELAALEIATAWIDGEIVVLTHEG
VPSFQALQNAFDAAGTADIVYYAFDLPYVAGRDIRAEPLKVRRELLRQVVARSKGKHVKF
SEAFDKPVGDLVASACRLGLEGIIGKRLSAPYVSRRTDDWIKLKCTQRQEFVIVGYTDPK
GSRKGFGALLLAVHEPGGGLRYAGNVGTGFDDKALLELHRKLAGIEQAASALTKGKPRAL
RQVHWVRPTLVGEVSFGEWTSDGHVRHATFRGLRTDKPPKKITREVPMPADKLSGRKDPE
KNRKEGATKAPKGMKLSNPDRVIDPSSGATKLDLARYYGLVAPLMMEHLRNRPVSFVRAP
AGIQGEHFFQRHSESPIPGVIALPERLYPGHPSLMESSNEAAILAAAQLNVVEFHTWNAL
KSSIGKPDRMLFDLDPGEGVDWPAVQQGAELVRVLLQELGLRGWLKTSGGKGLHVVVPIR
KQYGWDAVKDFSEAMVRHLAQTLPKLFVAKSGPKNRVGKIFADYLRNGFGATTVAAWSAR
ARPGLGVSVPVRWTELDGLKGSAQWTIANIHTRLDVGNDPWDDYAPQAIGKAMKQLGVKA
NT seq 2523 nt NT seq  +upstreamnt  +downstreamnt
atggtggacagccttaaaaaataccgcgagaagcgcaatttctcggtcacgccggaaccc
gccggaggcggggaatccggcgacgccggcctggtttttgtcattcagaagcattgggca
agccgccttcactatgatttccggctggagctggatggggcgatgaaaagctgggcggtg
ccgaaagggccgtcgttcgatccctcgatcaaacgcatggcagtgcaggtcgaagaccac
cccatcgcctacaaccagttcgaaggcaccatccccaagggccaatatggggccggcaag
gtaatcatctgggacgagggccgctggacgcctataggcgaccccaggaagggatacaag
gcaggtcatctgaagttcacgctggatggcgtgaagctgcgcgggcgctgggcgctgatc
cgcatgaagggcaaagagagtgaccggcagccgccctggctgttgatcaaggagagcgac
gagtacgcgcggccggaccaggatttcagtgtggtggacgagctgccggatagtgtcgtg
cctttgcgtgccaaaaacacgggaacgcgggcgcctggcaagcctaagacccgcagttcc
cagaaggtggaatccgttgccgccttgccgggcaaggcagctgccctgcctgcggcgctc
aagccccagctggcgaccctggttgaaggtgcgccgcgcggtggcgaagactggtcatat
gaaatgaagttcgacggctaccggatcctggcaaggatcgaggacggaaaggccgcgttg
ttcacccggaacggccacgattggacggccaagatgccccgcctggcccaggagctggcg
gcgttggagatcgccaccgcctggatcgacggcgagatcgtggtgctgacgcatgaaggc
gtgcccagtttccaggccttgcagaacgcgttcgatgccgcaggcaccgcggatatcgtc
tactacgcctttgacctgccctacgttgcggggcgcgatatccgggccgagccgctcaag
gtacggcgtgaacttctgcggcaggtcgtcgcaagaagcaagggcaagcacgtgaagttc
agcgaggccttcgacaagccggtgggagacctcgtcgcctcggcatgcaggttgggcctg
gaaggcatcatcggcaagcgcctgtccgcaccctatgtgtcccgacgcacggacgactgg
atcaagctcaaatgcacccagcggcaggagttcgtcatcgtcggctataccgatcccaag
ggtagccgcaagggctttggcgctttgctgctggcggtgcatgagcctggcggggggctg
cgctacgcgggcaacgtcggcaccgggttcgatgacaaggcgctgctcgagctccatcgc
aagctggccggcatcgaacaggcggccagcgcgctgaccaaaggaaagccgcgggccctg
cggcaggttcattgggtacgccccacgctggtgggcgaggtctctttcggagagtggacc
agcgacggccacgtgcgccacgcgaccttccggggcctgagaaccgacaaaccaccaaag
aagatcactcgcgaggtgcccatgccagccgacaagctttccgggcgcaaagatccggag
aaaaacaggaaagagggcgcgacaaaagcgccgaagggaatgaagctctcgaatcccgat
cgcgtgatcgatccttcctccggagccaccaagctcgatctggctcgctactacggactg
gtggccccgctgatgatggagcatctgcgcaaccgtcccgtatcctttgtcagggcgccc
gcgggcatccagggcgagcacttcttccagcgtcattcggagtcccccattcccggggtg
attgcgttgccggagcgcctttatccggggcatccctccttgatggagagttcgaacgaa
gcggcaatactcgccgccgcccagctgaacgtcgtggagttccacacgtggaacgcgctc
aagagctcgatcggcaagccggacaggatgctgtttgatctggaccccggagagggggtg
gactggccggccgtccagcagggcgcggagctggtgcgcgtgttgctgcaggaactcggc
ctgcgcggttggttgaagaccagcggcggcaagggcctgcatgtagtcgtgcccatccgc
aagcagtacggttgggacgccgtcaaggacttctcggaagccatggtgcgccatctggcg
caaacgctgccgaagctgttcgtcgccaaaagcggtcccaagaaccgcgtgggcaagata
ttcgccgattatctgcgcaacggcttcggcgctacgacggtggcagcctggtctgcccgc
gcccggccgggcctgggggtatcggttcctgtccgttggaccgagctggacggactcaaa
gggtcggcgcaatggaccattgccaatatccacacccgcctcgatgtgggaaatgatccg
tgggatgactacgcgccccaggcgatcggaaaggccatgaagcagctgggcgtcaaagcc
tga

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