Acidovorax sp. JS42: Ajs_1175
Help
Entry
Ajs_1175 CDS
T00455
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs02024
Quorum sensing
ajs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ajs_1175
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ajs_1175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajs03019
]
Ajs_1175
03036 Chromosome and associated proteins [BR:
ajs03036
]
Ajs_1175
Messenger RNA biogenesis [BR:
ajs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ajs_1175
Chromosome and associated proteins [BR:
ajs03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Ajs_1175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
ABM41407
UniProt:
A1W582
LinkDB
All DBs
Position
1240851..1241102
Genome browser
AA seq
83 aa
AA seq
DB search
MSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STIVPGRAVNFSTAEPAADGDNQ
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaataaaggtcagcttcttcaagaccccttcctgaacgccttgcgtcgggagcat
gtgccggtttcgatctatttggtgaacggcatcaaactgcagggtcaaatcgaatccttc
gatcaatacgtcgtgctgctgcgcaataccgtgacgcagatggtgtacaagcacgctatt
tccacgatcgtgcctggtcgtgccgtcaacttctcgactgcggaacccgccgccgacggg
gacaaccagtaa
DBGET
integrated database retrieval system