Acinonyx jubatus (cheetah): 106969351
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Entry
106969351 CDS
T04657
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04151
PI3K-Akt signaling pathway
aju04510
Focal adhesion
aju04512
ECM-receptor interaction
aju04974
Protein digestion and absorption
aju05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
106969351
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106969351
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106969351
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106969351
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
106969351
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aju00536
]
106969351
Glycosaminoglycan binding proteins [BR:
aju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106969351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
106969351
NCBI-ProteinID:
XP_026891792
UniProt:
A0A6J1XH24
LinkDB
All DBs
Position
B4:complement(73290752..73321963)
Genome browser
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacccggagacattaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggcgacaaa
ggtgaaaaaggtgcccctggaccgcgtggcagagatggagagcctgggacccctggaaat
cccggcccccctggtcctcctggcccccctggcccccctggcctcggtggaaacttcgcg
gcccagatggccggaggatttgacgagaaggctggtggtgcccagatgggagtgatgcaa
gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggagaacctggggaacccggtgtctctggtcccatgggt
ccccgcggtcctcctggcccccctggaaagcctggcgatgatggtgaagccggaaagcct
ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggtgagagtggttcaccgggtgagaatggttctccg
ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccctgctggggct
gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt
cctgctggtggtcctggcttccctggtgctcccggtgccaagggtgaagctggccccact
ggtgctcgaggccccgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc
cctggaccggccggtgcctctggtaaccctggaactgatggaattcctggagccaaagga
tctgctggtgctccgggcatcgctggtgctcccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactggtccgctgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga
gcccctggtcctgctggtgaggaaggcaagagaggtgcccgtggagagcctggtggtgct
gggcccgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaa
gatggtctggcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggc
cccaagggtgccaacggcgatcctggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggacgccccggtgacgccggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggt
gtcatgggtttccccggccccaaaggtgccaatggcgaacctggcaaggctggtgagaag
ggacttcctggtgcccctggactgagaggtcttcccggcaaagatggtgagaccggtgct
gcggggccccccggacccgctggacctgccggtgaacgaggcgagcaaggtgcccctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaagcca
ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc
ctccctggcactcctggcacggacggccccaaaggcgcatctggcccagccggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccctggg
aaggacggtggacgaggcctgactggtcccattggcccccctggccctgccggtgccaat
ggtgagaagggagaagttggacctcctggtcctgcgggaactgctggtgctcgtggagcc
ccgggtgaacgtggagagaccggcccccccgggcccgctggattcgcaggacctcccggt
gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctggacctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccctgga
gctgctggccgtgtcggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagtggcccccctggccgt
gctggcgaccctggcctccaaggtcctgccgggccccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcaaagg
ggcattgttggtcttcctgggcaacgtggtgagagaggattccctggcctgcctggccca
tcgggtgagcctggcaagcagggagctcccggagcatctggagaccgaggtccccccggc
cccgtgggtcctcctggcctgactggtccttctggcgaacctggacgagagggaagccct
ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag
actggtcccgtgggtgctcctggagcccctgggccccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccctgca
ggaccagccggagcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggcctgaagggacaccgtggcttcactggtctgcagggt
ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaatggaatc
cctggccccattggacctcctggcccccgcggacgttcgggcgaaactggcccagctggt
cctcctggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagctggcaacctgagacagcacgacgccgaggtggatgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgagtgttcccaagaagaactggtggagcagcaag
agcaaggacaagaagcacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccaccgagggctcccagaatatcacctaccactgcaagaacagcattgcctacctg
gatgaagcggctggcaacctcaagaaggccctgctcatccagggctccaatgatgtggag
atccgggctgagggcaacagcaggttcacatatactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcacgtctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
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integrated database retrieval system