KEGG   Acinonyx jubatus (cheetah): 106989010Help
Entry
106989010         CDS       T04657                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju05034  Alcoholism
aju05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:aju00001]
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    106989010 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    106989010 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aju01009]
    106989010 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aju03019]
    106989010 (HDAC6)
   04131 Membrane trafficking [BR:aju04131]
    106989010 (HDAC6)
   03036 Chromosome and associated proteins [BR:aju03036]
    106989010 (HDAC6)
Enzymes [BR:aju01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106989010 (HDAC6)
Protein phosphatases and associated proteins [BR:aju01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106989010 (HDAC6)
Messenger RNA biogenesis [BR:aju03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     106989010 (HDAC6)
Membrane trafficking [BR:aju04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    106989010 (HDAC6)
Chromosome and associated proteins [BR:aju03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     106989010 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 106989010
NCBI-ProteinID: XP_026909697
LinkDB All DBs
Position
Unknown
AA seq 1178 aa AA seqDB search
MEKRASSTRRPAGRQTFRSVSHGRSLRKGPRPNRVRGEVSPTMTSTGQDSTSTRQRRSRH
NPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLSQAAEQDLIMDLRRLDLNL
EAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
DELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAV
LGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHGQGYTINVPWNQVGMRDAD
YIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAEGKL
ILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSALASLCCALEALEPFWEVL
VRSVETPEEDILEEDSAEEKDEEGLWRPPALPILTWPMLQARTGLVYDQRMMGHHNLWDN
HHPEMPQRVLRIMQRLEELGLAGRCLALPARPATEAELLTCHSGEYVGRLRATEKMKTRE
LHREGSNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLNGTAVVRPPGHHAERDAAC
GFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGT
FFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRVMKVEDKEEPSLSKSVTNPGSAK
RMTTPEGNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQDQSLEAPTQKAMLDQTTS
QAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPEQGATSQISPSELIENLRT
LELNCKAQEAPESQIPEKDKLLGEAAGGQDMLIQSFGVHANTDQAIFYAVTPLPWCPHLV
AVCPTPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSAHMLQHHEGSGHPLVLSYV
DLSTWCYSCEAYVHHQALLEVKNIAHQNKFGEDMPHSH
NT seq 3537 nt NT seq  +upstreamnt  +downstreamnt
atggaaaagcgggcctcaagcactcgccgcccggcgggtcgccagacatttcgcagcgtg
agccatgggcggagtttgagaaaagggccgcgcccaaaccgcgtcaggggtgaagtctcc
ccgaccatgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcat
aacccccattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggt
gccatactctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaacctt
gaggccaagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccac
tgcctctgggatgacagcttccctgaaggccctgaacggctccatgccatcaaggaacag
ctgatccaggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaag
gacgaactgatgttggttcacagcctagaatacattgatctgatggagacaacccagtac
atgaatgagagagagctccgcatcctagcagacacctatgactcagtttatctacatccg
aactcctatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtc
ctggggaaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccag
cacagtcttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgct
caacagaagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaa
ggaacccagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttat
gagcagggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggt
catggccagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgac
tatattgctgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctg
gtcctggtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccacc
actccagcagggttcgctcagctaacccacttgctcatgggtctggcagaaggcaaactg
atcctgtctctggagggtggctacaaccttcgctccttggctgagggcgtcagtgcctca
ctccacacccttctgggagacccttgccccatactggagtcccctggtgccccctgccca
agtgccctggcgtcactgtgctgcgctctggaagccctggagcccttctgggaggtcctt
gtaagatcagttgagaccccggaggaggacatcctggaggaggatagcgcagaggagaag
gatgaagagggactgtggcggcccccagcgctcccaatcctgacgtggcccatgctacag
gctcgcacagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaac
caccaccctgagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggc
cttgcggggcgctgcctcgcgctgcccgcacgtcccgccacggaagccgaactgctcacc
tgccacagtggtgagtacgtgggtcgtctgcgggccacagagaagatgaaaacccgggag
ctgcaccgcgagggttccaactttgattccatctacatctgccccagcaccttcgcctgt
gcgcagctggccactggcgccgtctgccgcctggtggaggctgtgctggcaggagaggtt
ttgaatggtaccgctgtggtgcgtcccccaggacaccatgctgagcgggatgccgcttgt
ggtttctgcttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtggg
caggcgctgcggatcctgatagtggactgggatgtccatcatggtaatggaactcagcac
atatttgaggaggaccccagcgtactgtacatttccctgcaccggtatgaccatggcacc
ttctttcccatgggggaggagggtgccagcagccagataggccgggccgcaggcactggc
ttcactgtcaacgtggcctggaatggaccccgtgtgggtgacgctgactacctggccgcg
tggcatcgcctggtgcttcctattgcctacgagtttaacccagagctggtgctggtctca
gcgggctttgacgctgcatggggggaccccctggggggctgccaggtgtcgcctgagggc
tatgcccacctcacccacctgctgatgggccttgccaatggccgcattatcctaatccta
gagggtggctataacctgacatccatctcggaatccatggctgcctgtacccgctccctc
cttggggacccaccaccactgctgaccttgtcgcggcctccactatcaggggccctggcc
tcaatcaccgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaag
gtggaagacaaggaggaaccctccctttctaagtcagtcaccaaccctgggtcagctaag
aggatgaccacaccagaagggaacattctggatgcaggcacagagaaggctgtctcagca
tcatctgtggaagagtccactctaggccaacctaagtcagagactgctatggtggagctc
agtcaggaccagtccttggaggctcccacacagaaagccatgctggaccagaccacctca
caggcagccacagtggaggccacagcaggccagaccacctcagaggaggctgttggggga
gctgagatgatccaaacccctccagctttatgtactgacaaccagactcccacagcctca
cctgagcaaggtgccacatcccaaatatctcccagtgagctgattgagaatctcaggacc
ttggaactaaactgcaaggctcaggaggcaccagaatctcagatcccagaaaaggataag
ctactgggagaggcagctggaggtcaggacatgctgattcagagctttggggtccatgct
aacactgaccaggccatcttttatgccgtgacaccgctgccctggtgtccccatttggtg
gcagtatgtcccacacctgaatcaggcctggatgtgacccaaccttgtcaggactgtgga
acactccaggagaactgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtc
agtgcccatatgctgcaacaccacgaagggtcaggacacccgctggtcctcagctacgtc
gatctgtctacctggtgttacagctgtgaggcctatgtccaccaccaggctctcctagaa
gtgaagaacatcgcccaccagaacaagtttggggaggacatgccccactcacactga

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