Acinetobacter lactucae: OTEC02_15875
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Entry
OTEC02_15875 CDS
T05220
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
alc
Acinetobacter lactucae
Pathway
alc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OTEC02_15875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alc03019
]
OTEC02_15875
Enzymes [BR:
alc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
OTEC02_15875
Messenger RNA biogenesis [BR:
alc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OTEC02_15875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ARD30105
LinkDB
All DBs
Position
complement(3341843..3343306)
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AA seq
487 aa
AA seq
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MQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNAT
PSQIKEVFGRRCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTI
EQDFARRDFSINTLYYQPRKAIVLDFCKAIDDVKNKTLRLLGDPAQRFEEDPVRMLRTLR
FAAKLNFKIDSDILDIFDAEMTQLLRDVSPHRLYDESQKLFTMGHLARVLPMLIEFGVWK
QLFADIQPNLTPFILRAAKNTDQRIQVGKTINPAFFYAVLLWQPFLERCEFYFSKGVVPA
EARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHARFRAGFD
FLLLREKSGDDTTQGMGSWWEAYQEMSNDEKEAAISQYNRQKARNRRKVAAEPIENNKVE
TEIEPLVDIPEPRSRRGKKERVRQEQSMGRFVEKATASETGVMGDHPILKRKRVQRDLSQ
VIFGPTQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaccttgcgagcgtcaaaatgtggtttgtccacagcccaacttccttcttcgatt
ttagatgtgatcgatagcctgactaaagctggctatgaagcttatattgttgggggtggt
gtccgtgatttaatgctagggcttaatcctaaagatttcgatgcagtcactaatgcaaca
ccttcccaaattaaagaagtttttggtcgacgttgtcgaatcattggccgtcgatttgaa
ttagcacatgtctattcaggacgtgagcttattgaagttgctactttccgtgctcctcct
aaaaaagcagtcaccagtgcttcaggcatgattttacgtgacaataactggggtactatc
gaacaagactttgctcgccgtgacttttcaatcaatacgctatattaccaaccgcgtaag
gctattgtgctcgatttctgcaaagcaattgacgatgtaaaaaataaaaccttacgttta
ttgggtgatccggcacagcgctttgaagaagacccggtgcgtatgttgcgaactctacgt
tttgcagctaaattaaatttcaaaattgattcagatattctcgatatatttgatgcagag
atgacgcagctcttgcgtgatgtttctccgcatcgtttatatgatgaatctcagaagctc
tttacaatggggcatttggcgcgtgttttgccaatgttgattgagtttggtgtctggaaa
caactttttgcagatatccagccgaacctcactccgtttattctaagagcagcaaagaat
acagatcagcgtatccaagtgggtaaaacaattaacccagcatttttctatgcagtctta
ttgtggcaaccatttttagagcgttgtgaattttatttctctaaaggtgttgtaccagca
gaagcgcgtgcacaagctggtctagatgtattaaagcgtcaagcaacacgcacagtgatt
ccgcgttttgcagaaacttttattcgtgaagtttgggaaatgcagactcgtttgcttaat
ccgaaaccacagcaaattgaagcattggctggacatgcgcgtttccgtgctggttttgac
ttcttattacttcgtgaaaagtcaggtgatgacacaacacaagggatgggaagctggtgg
gaagcctaccaagaaatgtcgaatgacgaaaaagaagctgcaattagccagtacaatcgt
cagaaagctagaaaccgtcgtaaagtcgctgctgaacctattgaaaataataaagtcgag
acggaaattgaacctttggttgatattcctgaaccacgcagccgtcgtgggaaaaaagaa
cgtgttcgacaagaacaatcgatggggcgtttcgttgaaaaagccactgcttcagaaaca
ggagtgatgggcgaccatccgattttgaagcgtaagcgagttcaacgcgatttaagccaa
gttatttttgggccaacgcaatga
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