Agrobacterium larrymoorei: CFBP5473_04395
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Entry
CFBP5473_04395 CDS
T06268
Name
(GenBank) efflux RND transporter permease subunit
Organism
alf
Agrobacterium larrymoorei
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QCI97222
UniProt:
A0A4D7DSH2
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Position
circular:complement(934192..937515)
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AA seq
1107 aa
AA seq
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MNFSAWSIRNPIAPLLGFALLLFLGIKAFYDLPITRFPNIDVPVVAITVTQSGASPSELE
AQVTKEVEDAVASISGIDEIQSTVTDGQSLTTVLFRIEKPTEEAVQDTKDAIDKIRSELP
ADIEEPVVSKIDVEGQAIQTFAVSSPNMTLEELSWFVDDTIKRALQGQPGVGKIDRYGGA
DREVRVALNPAKLDAYGITAADVNNQLRGTNIDLGSGRGQVGGNEQTIRTLGDARDVATL
SNTTIALSNGNFVKLSELGTINDTYEEPKSFSRFNGNPAVTFAVFRAKGASEVSVAETVA
QNLDKVRKDHPDVAIQMVDDSVYFTYGNYEAALHTLMEGSILAVIVVLLFLRNWRATLIA
AVALPLSAIPTFWIMDVLGFSLNLVSFLALTLATGILVDDAIVEVENISRHIKMGKSPYR
ASLEAADEIGLAVIATSFTIIAVFVPVSFMPGIPGQYFIQFGLTVAFSVFFSLMVARLIT
PLMAAYLMRADDAVDDHHDNDGRLMKAYTRMVTATTSKWWSRYLTLAGAIAFLVGSMMLL
AQVPGSFLPPDDSSRVVLSIELPPNATLEETDATTSKIYQAVRGIDGVEHVFILGGASPK
GDLELRRATVRVILKTIDHSLVKTLVNDGLGSIPLIGHYLPKVEDNGRHRPQWDVERDIF
ASVQGIPDVRIIKLNDRAERELTFNFLSSSEEDLQKAVGVLESRLRASPILVNVSSEGAL
PRPELQIRPRKDEIARLGITPQQISQTVRVATIGDIDAQLTKISLDDRQIPIRVQASLDV
RRDLAAIRALKIKTASGATVPLYSVADIDYSEGPSSIKRNDRSRVVAIGSDVPFGTALDT
STAEFKRIVQETQLPPTVRLAESGDAKVQGEMQQGFVNAMLLGLLLVLVVLILLFKDVIQ
PFTILFSLPLAIGGVAVALIVTQNALSMPVLIGILMLMGIVTKNAILLVDFAIEMRRHGM
ERVHAMVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSFRAPMAIAVIGGIIVSTVLS
LVVVPAFFLIMDDLSLLLARIFGRFVGKKEEEHPILSSEELSILARENKETLSSVEERLA
AVEKSTERDKRGSNSNNVLRLPPLAAE
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccgcatggtctattcgcaaccccatcgcgccgctgctcggctttgcgctg
ttgctcttcctcggcatcaaggcgttctacgacctgccgatcacgcgctttcccaatatc
gacgttccggtcgtggcgatcaccgtcactcagagcggcgcttccccatccgaactcgaa
gcgcaggtgacgaaggaggtcgaggacgctgtcgcctccatcagcggcatcgatgaaatc
cagtccaccgtcaccgacggtcagtcgctgaccaccgttcttttccgcattgaaaagccg
acggaagaggcggttcaggacaccaaggacgctatcgacaagatccgctccgagctgcct
gccgatattgaagaaccggtcgtcagcaagatcgatgtcgaaggccaggccattcagacc
ttcgccgtctcctcccccaacatgacgcttgaagagctgtcatggttcgtggacgatacg
atcaagcgtgctttgcaaggccaacccggcgtcggcaagatcgatcgctatggcggcgca
gaccgcgaagtgcgcgtcgcgctgaaccctgccaagctcgatgcctacggcattacggcg
gcggatgtgaacaaccagctgcgcggcaccaacatcgacctcggctctggccgtggacag
gtgggaggcaacgagcagacgatccgaacgctgggcgatgcccgcgacgtggcgacgcta
tccaacaccacgattgcgctttccaacggcaatttcgtcaagctttccgagcttggcacg
atcaacgatacctatgaagagccgaagtccttctcccgcttcaatggcaacccggctgtc
acttttgcagtgttccgtgccaagggagcaagcgaagtctctgttgccgagacagtcgcg
caaaatctggacaaggtgcgcaaggatcacccggatgtcgccatccagatggtggatgac
tccgtttacttcacctacggcaactacgaggcagcccttcacacgctgatggaaggatcg
atcctcgccgtcatcgtggtgcttctgttcctgcgcaactggcgcgcaacgctgatagca
gccgttgcgctgccactatccgcgataccgacattctggatcatggacgttttgggcttc
tcgctcaatctcgtcagcttcctcgccttgacgctggccacaggtattctggtggatgac
gccatcgtggaggtggagaacatctcccgccacatcaagatgggcaagagcccctaccgc
gcgtcgctggaagcagcagatgaaatcggtctggcggtgattgcgaccagtttcaccatc
atagccgtcttcgttcccgtctccttcatgccgggcattccggggcaatacttcatccag
ttcggcctgaccgttgccttctccgttttcttctcgctgatggtcgcccgcctcatcacg
ccgttgatggccgcttacttgatgcgcgcggatgatgccgtggacgatcatcacgacaat
gacggtcgtttgatgaaggcctatacgcgcatggtgacggccaccacgagcaaatggtgg
tcgcgttaccttacgcttgctggcgccatcgcctttctcgtcggctccatgatgctgctt
gcgcaggtgcccggcagcttcctgccgccggatgattcctcgcgcgtggtactttccatc
gagcttccgccgaatgcgacacttgaggagacggatgccacgacctctaaaatctatcag
gcggtgcgcggcatcgatggcgtggaacacgtcttcattctgggcggcgcatcgccaaag
ggcgatctggaattgcgccgcgccaccgtgcgcgtcatcctcaagaccatcgaccattcg
ctcgtcaaaacgctggtcaatgacggtctcggctccattccgctgatcggccactatctg
ccgaaggtggaagacaatggcagacatcgcccgcaatgggatgttgagcgcgatattttc
gcaagcgttcagggcatccctgatgtccgcatcatcaagctcaacgaccgcgccgagcgc
gaactgaccttcaatttcctctcctccagcgaagaggatttgcagaaggcggtcggcgtg
ctggaatcgcggctgcgggcctcgccgatcctcgtcaatgtcagctcggaaggtgcactt
ccgcgcccggaactgcaaatccgtccgcgcaaggacgaaattgcgcgtctcggcatcacg
ccgcagcaaatctctcaaacggttcgcgtcgccactatcggcgatatcgatgcgcagttg
acgaagatttcgctggatgaccggcagatcccgatccgtgttcaagcctcgctagatgtg
cggcgcgatcttgccgccatccgcgcgctgaagatcaagaccgcctccggtgcgaccgtg
ccgctctatagcgtggccgatatcgattattcggaaggtccaagctcgatcaagcgcaac
gaccgcagccgcgtcgtcgccatcggttccgatgttccgttcggcacggcactcgatacg
tcgactgccgaattcaagcggatcgtgcaggaaacacagttgccgccaacggtgcgcctt
gccgaaagcggagacgccaaggtgcagggtgaaatgcagcagggcttcgtcaacgccatg
ttgcttggcctgctgctggtgcttgtggttctgatcctgctgttcaaggatgtgatccag
cccttcaccattctgttctcgctgccgctcgccatcggcggcgtggcggtggcgctcatc
gttacacagaatgcgctctccatgccggttctgatcggcattctgatgctgatgggtatc
gtgaccaagaacgccatcctgctggtggatttcgcaatcgaaatgcgccgccacggcatg
gaacgtgtgcatgccatggtggaggcaggccgcaagcgcgcccgcccgattatcatgacc
tccatcgccatgtctgcgggcatgctgccgtctgcgctcggtgtcggcgaaggcggctcc
ttccgcgcgccaatggcgattgcggtgattggcggcatcatcgtctcgacggtgctgtct
ctggtcgtcgtgcccgccttcttcctcatcatggacgatctgtcgttgcttctcgcacgc
atcttcggtcgcttcgtcggcaagaaagaagaagaacatccgatcctatcctcggaagaa
ctctccattctcgcgcgcgagaacaaggaaactctgtcctccgtggaagagcgtctggcc
gcggtggagaaaagcacggaacgtgataaacgcggcagcaactccaacaatgtgctgcgc
ctgccgcctcttgccgccgaataa
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