Agrobacterium larrymoorei: CFBP5473_20420
Help
Entry
CFBP5473_20420 CDS
T06268
Name
(GenBank) ROK family transcriptional regulator
Organism
alf
Agrobacterium larrymoorei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_IclR
MarR_2
HTH_5
HTH_24
MarR
HTH_Crp_2
TrmB
Penicillinase_R
HTH_11
Crp
HTH_9
Cdc6_C
Motif
Other DBs
NCBI-ProteinID:
QCJ00291
UniProt:
A0A4D7E565
LinkDB
All DBs
Position
linear:complement(1335206..1336486)
Genome browser
AA seq
426 aa
AA seq
DB search
MKSMEISRYIFLIRKMLCPSMKPLFIVQEIGMDEFRELFGSLDAPAGKIVRAIASSGSVT
ATELVSSTGLARSTVSTLLTDLKERGIVLEGETRSGGFGRPTRLISLNPDKGFCAGVLLG
LNELRIAVCDLAHTVLSDCWFEMPPDYTPEFAAEQVALHLKEQCDAIGIEASKLIGLGLA
VSAPVSFDGRILNGSILPTWSGIDVANVFSSRIECPIFLENESHCGALAEMTWGAAVGER
NFVLFKFDLGIGGAIVINGTVQRGAFGNAAEFGHISLNPHGPLCRCGNRGCLETYAGGFN
LMRIAEQATGKKVNLEEFVKLIQEGEPSYVRLMEDAAEMAGWGMGIASTIISPPLFVISG
KLALAGEPFVAALRRNFARHSLRPPNYAPELRSPRFVTGKFTGNDDTVMGAVALVLHQHG
QVSFPG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatccatggaaatttcccgctatatttttctaataagaaaaatgttgtgcccgtcg
atgaaaccgctattcatcgttcaggagatcggaatggatgaattcagagaactttttgga
agcttagacgcgcccgccgggaaaatagtacgtgcaattgcgagctcggggtccgtgacc
gcgacggaactggtctcttcgaccggccttgcccggtcgacggtgtctacattgctgacc
gatctgaaagagcgcggaatagttttggaaggcgaaacccggagcggagggttcgggcgc
cctacacgtctgatatccctcaatcctgacaagggtttctgcgccggagttctgcttggc
ctgaacgagcttcggatcgccgtttgcgatctagctcacaccgttctgtccgattgctgg
ttcgaaatgccgccagactatacgccggaattcgctgccgagcaggtagccctacatctg
aaggagcaatgcgacgcgattggtatcgaagcgagcaaactgattggactggggcttgcc
gtttccgcgcccgtgtccttcgatggcagaattctcaacggctctatattgcccacatgg
tcgggcatagacgttgcaaacgtgttttcgtcccggatcgagtgcccgatttttcttgaa
aatgaaagtcattgcggcgcactcgcagaaatgacatggggtgccgccgtgggagagcgg
aacttcgttctgttcaaattcgatctcggcattggtggcgcaatcgtcatcaacggcacc
gtgcaacgcggggcgttcggtaacgcagccgagttcggccatatctctcttaatccccat
ggcccgctatgccgttgcggcaaccgtggctgtcttgagacctatgccggaggattcaac
ttgatgcgcatcgccgagcaggcgacgggcaaaaaggtgaatctggaagaattcgtcaag
ctgatacaggagggcgaaccctcttacgtgaggcttatggaagatgctgccgaaatggct
ggctggggcatgggaatagcctcgactatcatcagcccccctctattcgtcatctcgggc
aagcttgccttggcaggggaaccttttgtcgctgccctaaggcgcaactttgcaaggcac
agcctgcgcccgcccaattacgcacccgaattgagatcccctcgcttcgtcaccgggaaa
ttcacgggaaacgacgacaccgttatgggagccgtcgcactggttcttcatcaacatgga
caggtaagtttccccggttga
DBGET
integrated database retrieval system
