Actinobacillus lignieresii: NCTC10568_01150
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Entry
NCTC10568_01150 CDS
T06678
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10568_01150 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_01150 (recB)
Enzymes [BR:
alig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC10568_01150 (recB)
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10568_01150 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_30
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEB26418
LinkDB
All DBs
Position
1:complement(1132006..1135614)
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AA seq
1202 aa
AA seq
DB search
MKTLSPIELPLNCTALIEASAGTGKTFTMANLYLRLLLGVGCAPLTVEQILVVTFTKAAT
EELRDRIRRNIKACRRFLQEYDAEKTYDINDFFFQLHQHLESVEEAILRLRIAEREIDLA
SIFTIHSFCQKMLFQFAFDSGMRFDNDLQPDESDLLRRLSEEVWREMFYPMGLTETAAVA
EYLGTPDNAFEAIRAFVPAELPPLSDEQHWLNGELAVHLAALQHFLADAKQHWSAHGEEI
SRLIESELAKKYKTGEKKALNRRSYQTRYLEKWRASVDEWATSSLSYLPEEQFERFCQEF
LNEKAEEGAEPLVHPHFAKNQQILTAYQQQFANKQKPLLLYQFLLAVRTKLADYKATHSE
KSFNDMLTLLNQALKGERGAALAAQIRAQFPFAMIDEFQDTDKEQYEIFHKIFMQETHTN
HGFIMIGDPKQSIYKFRGADIFTYLTASQQAQQKRTLAKNWRSLPPIVSATNRLFEFPAA
AANSPFLYQGIQFHSVEAKASEAELISADYVNCYLQAKFDEKLAAKQCAYQIQQQLKQME
AGEFGLKFTNTTEEINPFQAKDIAILVRSHSQATLIKSALAELGIRSVFLSEKESVYQSE
TAKELLWVLYACLNPYHQRHLLSALGTTLWGLSATEIHQLKNSELQWDEQVGRFIAYQQI
WQQQGILPMLHKLFMQEGIIERLRANPRDSDRRLTDLLHLTELLQNAMPSLENESALVRW
YERQLAKTDSTEEHILRLESEEELIKIVTIHGAKGLQYPIVWLPFIGKKNQGSKASNLAI
YRDEQGQAHWYFGKPSEQVQALMDREELAEDLRLLYVAVTRAESQLNLILPQRFEDGWNA
VHYLLSNGKIGLDKSYKAETSTADYLQQKGIDCQAVELDEKIANDEWRPTPFVSEALSAC
HFTGQIQQTGLVTSFSALHQQHEWAMQHHTEYSMPKAFESAGQDYDQQQVLTFETDNLFA
LDNEETNAYSPYQFPHSTKVGNILHSFFEHSDFQQAVDFEQILTICEQLDLDENWHEPLQ
QWFEKVLATPFSETEFALKDVPMTKRLNEWQFYLRLKNSDGLRRLNQLLKQYSAVSAKLP
ELNLPQLEGYIRGFVDCIVQMHGKFYLIDYKSNFLGYLAQDYSRQNLEKTIGQYRYDLQY
LLYTLALHRYLRVRLGGQYEYERDFGGVAYLFLRGMNGTPNSGVFFEKPCKQLIEGMDEL
FG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctttctccgattgaattgccgttaaattgtaccgcattaattgaagcgtcc
gccggtaccggtaaaacctttaccatggcaaacttatatttgcgtttgttgctgggtgtc
ggttgtgcgcctttaaccgttgagcagattttggtggtaacttttaccaaagcggcaacc
gaagaattacgtgatcgtattcgtagaaacatcaaagcctgccgccgctttttgcaagag
tatgatgcggaaaaaacctatgatatcaatgatttcttcttccaattacaccagcatctt
gaaagtgtggaagaggcgattttacgcttacgcattgccgaacgagagatcgatttagcc
agcatttttaccattcatagtttttgtcaaaagatgctgtttcaatttgcgtttgattcg
gggatgcgttttgataacgacttgcagccggacgagagtgatttgttacgccgtttaagt
gaagaagtttggcgtgaaatgttctatccgatggggctgaccgaaacggcggcggtggcg
gaatatcttggtacgccggacaatgcttttgaggcaattcgtgcctttgtgcctgccgaa
ttgccgccattgtcggatgaacaacattggttgaacggagaacttgctgttcatttggct
gccttacagcattttttagcggatgctaagcagcattggtcggcacacggagaagaaatc
agtcgcttaattgaaagcgaattagcgaaaaaatataaaaccggtgagaaaaaagcactt
aatcgccgttcttaccaaacacgttacttagaaaaatggcgtgcttccgtggacgaatgg
gcgacaagttcgctttcctatttgccggaagaacagtttgaacgtttctgtcaggaattt
ctaaacgaaaaagcggaagagggcgcagaaccgttggttcatccgcattttgcaaaaaat
cagcaaattttgaccgcttatcaacagcagtttgcgaataaacagaagccgttattgctc
tatcaattcttactcgcagtgagaacaaagctcgcagattataaagcgacgcatagtgag
aaaagttttaacgatatgctcactttactcaatcaggctttaaaaggtgaaaggggggcg
gcgttagccgcacaaattcgtgcgcaattcccgttcgcaatgattgacgagttccaagat
accgataaagagcaatatgaaatcttccataagatttttatgcaggaaacgcatacgaat
cacggatttattatgatcggcgacccgaaacagtcgatctataaattccgaggtgcggat
attttcacttatttgaccgcttctcaacaggcgcaacaaaaacgcacgttagccaaaaac
tggcgttcgttgccgccaattgtgagcgcaactaatcgtttatttgaatttccggcagct
gctgcaaacagtcctttcttgtatcaaggtattcagtttcactcggtggaagcgaaagcg
agcgaagctgaattaatcagcgccgactatgtaaactgttatctacaagcaaaatttgat
gaaaaattagcggcaaagcagtgtgcttatcaaattcagcagcagcttaagcaaatggaa
gcgggtgaattcggcttaaaatttaccaatactacggaagagattaatccgtttcaggca
aaggatattgcgattttggtgcgtagccactcgcaagctacattgataaaaagtgcatta
gccgaactgggcattcgttcggtatttttgtcggaaaaagaaagcgtctatcaatcggaa
accgctaaagaattattgtgggtgttgtatgcctgtttaaatccgtatcatcaacgccat
ttactcagtgcgttaggcacaaccctctgggggctgtcggcaacggagattcatcagctt
aaaaatagcgaattacagtgggatgagcaggtagggcgatttattgcatatcagcaaatt
tggcaacaacaaggcattttaccaatgttgcataagttatttatgcaagagggaattatt
gagcgcttacgagctaacccgcgcgacagtgatcgccgtctaacggatttattgcattta
acggaattactacaaaatgccatgccgagcttagaaaatgaatcggcgttagtgcgttgg
tatgaacgtcaattggcaaaaacggatagcacggaagagcatattttacgtttagaaagt
gaagaagaactgattaaaatcgtgaccattcacggtgcaaaaggtttgcaatatccgatc
gtttggttgccgtttatcggtaaaaaaaatcagggttctaaagcaagtaatttggctatc
taccgtgatgaacaagggcaagcgcattggtatttcgggaaaccgtcagagcaagtacaa
gcactgatggatcgggaagaattggctgaagatctgcgtttgctttatgtagcggttact
cgagcggaatcacagcttaacttaattttgccgcaacgatttgaagacggttggaatgcg
gtgcattatttgctaagcaatggcaaaatcggtttagataaaagctataaagctgaaacg
agtacagcggactatttgcaacaaaaagggattgattgccaagcggttgaattagacgaa
aaaattgcaaatgatgaatggcgaccaaccccattcgtgtcggaggctttatccgcttgt
cattttaccggacagattcagcagacggggctagtaaccagcttcagtgcattacaccaa
caacatgaatgggcgatgcagcatcatacggaatatagtatgccgaaagcatttgagagc
gccggacaagattatgaccagcaacaagtgcttacgttcgaaacggataatctttttgct
ttggataatgaagaaaccaatgcctattcgccctaccaattccctcacagtaccaaggtt
ggcaatattctacacagtttctttgaacacagtgacttccaacaagcggtcgattttgag
caaattcttactatttgcgagcagctggacttagatgaaaattggcacgaaccgttacaa
caatggtttgaaaaggtacttgcaacgccgtttagtgagacggaatttgcgctaaaagat
gttccgatgacaaaacgtttgaacgaatggcagttttatttacgtttaaaaaattcggac
ggattacgcaggctaaatcaattgttaaagcaatacagtgcggtttcggcaaaattacct
gaattgaatttacctcagctggaaggctatatccgtggttttgttgattgtatcgtacaa
atgcacggtaaattttatctgatcgattataagtccaatttcttaggctatttagcacaa
gactatagccgacaaaatttggaaaaaacgatcgggcaatatcgctatgatctgcaatat
ctgctttatacgctggcgctacatcgctatttacgagtacgtttaggtgggcagtatgag
tatgagcgtgattttggcggcgtagcatatttattcttacgaggaatgaacggcacaccg
aatagcggtgtatttttcgaaaaaccttgcaagcagttaatcgaaggtatggatgaactg
ttcggttaa
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