Actinobacillus lignieresii: NCTC10568_01271
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Entry
NCTC10568_01271 CDS
T06678
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03030
DNA replication
alig03430
Mismatch repair
alig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10568_01271 (dnaX_1)
03430 Mismatch repair
NCTC10568_01271 (dnaX_1)
03440 Homologous recombination
NCTC10568_01271 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alig03032
]
NCTC10568_01271 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_01271 (dnaX_1)
Enzymes [BR:
alig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10568_01271 (dnaX_1)
DNA replication proteins [BR:
alig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10568_01271 (dnaX_1)
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10568_01271 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_16
AAA_30
AAA_2
DNA_pol3_delta
AAA_18
PIF1
AAA_assoc_2
AAA_7
AAA_19
Herpes_V23
TsaE
Motif
Other DBs
NCBI-ProteinID:
VEB26538
LinkDB
All DBs
Position
1:1261733..1263136
Genome browser
AA seq
467 aa
AA seq
DB search
MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK
GLNCETGITATPCGECANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQ
AQITNHLEFILQQENIPYESAAIEKLAKAAQGSIRDSLSLTDQAIAVSNANISLPIVQQM
LGLIDDHQPIELVTALAQADGEKAMAVIQSVAEKGVDWSQLLSDVAQTLHQIAMLQLLKN
SGQEQTQLHFLAKQIAPEDVQFFYQLMLNGKKELEFAPEQRAGVEMTILRALAFHPKRTE
EINRHPVMEAAKATSAQPHTPQQNIEQLKARLNQNHTQQAVNSAQNFAAQPVAKMPENPT
AYQQPAVNTAESGSTPVSPALAAMQARKQLQQTQAQLAKNEKKKSLS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttttagcccgtaaatggcgtccgcaacgtttttctgaagttgtcggg
cagcaacacgttttatccgcattagagaatggtctgcgtgaaggcagacttcatcacgcc
tacctgttttccggtacacgtggtgtaggtaaaacctcgattgcacgcctatttgctaaa
ggcttaaattgtgaaacaggtatcaccgccacaccttgcggtgaatgtgcaaattgtaaa
gcgatcgaagaaggtcgctttattgatctgattgaaattgatgcggcttcacgtactaaa
gtcgaagacacacgtgagttgcttgataatgttcaatacaagccaacagtcggacgcttt
aaagtttacctgattgacgaagtgcatatgctctcgcgtcacagcttcaatgcgctgctt
aaaacgcttgaagaaccgccggaatacgtgaagttcttactggcaacgaccgatccgcaa
aaacttccgattacgatcttatcccgttgtatgcaattccatttgcgtgcgttggatcaa
gctcagattaccaaccatctcgaatttatcctgcaacaggagaatattccctacgagtcg
gctgctattgaaaaactggcaaaagcggctcaaggcagtattcgtgactcattaagttta
actgatcaggcaattgcggtaagtaatgcgaatattagcttacctatcgtgcagcaaatg
ctcggtttaattgatgatcatcaaccaatcgaattagtcaccgcacttgcgcaagccgac
ggtgaaaaagcgatggctgtcattcaatccgttgccgaaaaaggggttgattggtcacaa
ctactctctgacgttgcccaaacgttacatcaaattgcgatgcttcagttgctcaaaaat
agcgggcaggaacaaactcagttgcattttttagcaaaacaaattgcgcctgaagacgta
cagtttttctaccaattaatgcttaacggtaagaaagaattggaattcgcaccggaacaa
cgtgccggtgtggaaatgaccattttacgagcattggctttccatccgaaacgtaccgaa
gagatcaatcgtcatccggtaatggaagcggcgaaagcaacaagcgcgcaacctcataca
cctcaacagaatattgaacagctcaaagctcgtttaaaccagaatcatacgcaacaagcg
gttaattctgctcaaaattttgcagcccaacctgttgcaaaaatgccggaaaatccaacc
gcttaccaacaaccagccgtaaatacggctgaaagcggttctacaccggtatcacccgct
cttgcggcaatgcaagcccgtaagcaattacagcaaactcaggcacaactggctaaaaac
gaaaaaaaaaaaagcctgagttag
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