Austrofundulus limnaeus (annual killifish): 106525046
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Entry
106525046 CDS
T06063
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
alim04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106525046 (smc1a)
04114 Oocyte meiosis
106525046 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106525046 (smc1a)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106525046 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
106525046 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
106525046
NCBI-ProteinID:
XP_013874609
UniProt:
A0A2I4C3Q7
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGSSSEYRINNKVVGLPDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIEKDRKKMDHVEEELKDKKKELGRMMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSILSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSMQNFQAVVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDASSSTND
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctatttaaagcttatagaaatcgaaaacttcaagtcgtacaaaggaagacaaatc
attggaccgtttcataagtttactgcaatcattggacctaatggatcgggaaaatccaac
cttatggatgccatcagctttgtgttggcagaaaagaccagtaacctgcgtgtaaagact
ctgaaggatctaatccatggtgctcctgtaggaaagccagctgccaacagagcttttgtt
agtatggtgtaccargaagataatggagaggaacgctccttcacaagggtcatcattgga
tcctcttctgagtaccgcatcaacaacaaggtggttggccttcctgattacagtgaggag
ctggaaaaacttggaattctgatcaaggctaggaattttctggtctttcagggagctgta
gagtcaattgccatgaagaaccccaaagagcgtaccgcgctttttgaggagatctcacgt
tctggagagctggcccaggaatatgaccggaggaaaaaagagatggtgaaagcagaagaa
gacacccagttcaattaccatcgcaagaaaaacattgctgccgagcgcaaagaagccaag
caggagaaagaggaggctgagaggtaccagcgccttaaagatgaagtagccagggccagc
gtgcagttacagctctttaagttgtatcacaacgagactgagatcgaaaagctgaacaaa
gagctaggtcagcggaacaaagaaattgagaaagaccgtaaaaagatggaccacgtggaa
gaagagctgaaggacaagaagaaggagctcggcaggatgatgagggagcagcagaccatt
gagaaagaaatcaaggagaaggattccgagttgaaccagaagaggccccagtacatcaaa
gccaaagagaatacatcccacaaaataaagaaactcgaggcagcaagaaaatcattacag
aacgcgcagaagatgtacaaaaagcgcaaagcagacatggatgagctggataaggagatg
agggcggtggagctggcaaagcaagagtttgaggaaagaatggaggaagaggcacaaagt
cagggccaggacctcacgctggaggaaaatcaggtcaagcaataccatcgtctaaaggaa
gaggccagtaagcgtgctgccactctggctcaggagctggaaaagttcaaccgtgaccag
aaggccgatcaggaccgccttgacttggaggagaggaagaaagtggagacggaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgagaaactggaggat
tatatcaccaccagcagacaatcgcttgatgaacagaagcgcatggaggaggagctgacg
gaggaagtggagatggccaagaggagaattgatgagattaacatggagcttaaccaggtt
atggaacaactaggagacgccagaatcgacaggcaggaaaatagtcgacagcagcgcaag
gcagagatcatggagagtatcaaaaggctctatcctggctctgtctatggccgtctgatt
gacctgtgtcagcccactcaaaagaagtatcagattgctgttaccaaagtgttgggcaag
aacatggacgccatcattgttgactcagagaagaccggcagagactgtattcaatacatc
aaggagcagagaggagagcctgagaccttccttcctcttgactaccttgaggtgaaacca
acagatgaaaagttgagagagctgcgaggagccaagctggtgattgatgttatccgctat
gagccgcctcacatcaagaaagccctacagtacgcttgtggcaacgctctggtttgtgag
aatgttgaggatgcacgaaggattgcttttggaggaccttacagacacaagacggtggcc
ttggatgggactttgttccagaagtctggtgtcatctctggaggagccagtgatctgaaa
gccaaggcgagacgttgggatgaaaaagcagtggacaaactgaaagagaaaaaggaaaaa
cttacagatgagctgaaggagcaaatgaaggccaagaggaaggaggcagaactacgtcag
gtgcaatctcaggcacatggtctgcagatgagactgaagtactctcagagtgatctggag
cagacgaaaaccagacacctgtccctcaacatgcaggaaaagtccaaactggagagcgaa
cttgcaaattttggccctcgcatcaatgacatcaaacggatcattcagtcccgcgaacga
gaaatcactgacctccgggaccgcatgaacctggtggaggatgaggtgtttgtggaattc
tgtaaggagattggagtgaggaacatccgagaatttgaggaggagaaagtgaagaggcag
aacgagattgctaagaaacgtcttgagtttgagacccagaagacccgcctgggaatccag
gtggactatgagaagaaccaactgaaagaggatcaggagaaggtcatgatgtgggagcaa
actgttaaaaaagatgaagctgaaatagaacgactaaagaaggaggagcacagacacatg
aaaatcattgatgagacgatggcccagctacaggacctgaagaaccagcacctcactaag
aaatccgaggttaatgataaaaatcatgaaatggaggagatccgtaaaaaacttggaggc
gccaacaaagagttgactcagctccagaaggaggtgactgccattgagaccaaactggag
cagaagcgtagcgaccgtcacaatctgctgcaggcctgcaaaatgcaggatatcaggttg
ccgcttcgctctggaacaatggatgacatcagccaaggagaggggagctcccagacagat
gagtccagcagccagaggacatccagcagtgttctggctaaagaagckctaatagagatc
gactacagcatcttatctgaagacttgaaggatgcattgtcagaggaagagataaaggca
gagacgaacacgctgcagcagcgtctgaatgaacagcagagtatcctgcagaggatcagt
gcacccaacatgaaagccatggaaaaactggagagtgtccgggacaagttccaggagacc
agtgatgagttcgaggctgcccgtaagagagccaaaaaggccaagcaagcctttgagcaa
atcaaaaaggagcgctttgatcgttttaatacctgttttgagtctgtggccacaaacaty
gatgagatctacaaggcgctctcacgcaacagcagtgctcaggcttttctaggcccagaa
aacccagaagaaccatatctagatggtatcaactataactgtgtagctccagggaagagg
ttcagaccgatggataacctgtcaggaggagagaagacggttgctgccctggctctgctc
tttgctattcacagctacaaaccggcccccttctttgttctggatgagattgatgccgct
ctggacaatactaacatcggcaaggtggccaattacatcaaggaccagtccatgcagaac
ttccaggccgtcgtcatttctctgaaggaggagttctacaccaaggcagactcactcatc
ggtgtttatccagagcaaggagattgtgtcatcagcaaagttctcacctttgacctctca
cagtatccagatgccagctcaagcacaaatgattaa
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