KEGG   Austrofundulus limnaeus (annual killifish): 106525046
Entry
106525046         CDS       T06063                                 
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim04110  Cell cycle
alim04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:alim00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    106525046 (smc1a)
   04114 Oocyte meiosis
    106525046 (smc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:alim03036]
    106525046 (smc1a)
Chromosome and associated proteins [BR:alim03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    106525046 (smc1a)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    106525046 (smc1a)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 AAA_29 ABC_tran Mce4_CUP1
Other DBs
NCBI-GeneID: 106525046
NCBI-ProteinID: XP_013874609
UniProt: A0A2I4C3Q7
LinkDB
Position
Unknown
AA seq 1231 aa
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGSSSEYRINNKVVGLPDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIEKDRKKMDHVEEELKDKKKELGRMMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSILSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSMQNFQAVVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDASSSTND
NT seq 3696 nt   +upstreamnt  +downstreamnt
atgggctatttaaagcttatagaaatcgaaaacttcaagtcgtacaaaggaagacaaatc
attggaccgtttcataagtttactgcaatcattggacctaatggatcgggaaaatccaac
cttatggatgccatcagctttgtgttggcagaaaagaccagtaacctgcgtgtaaagact
ctgaaggatctaatccatggtgctcctgtaggaaagccagctgccaacagagcttttgtt
agtatggtgtaccargaagataatggagaggaacgctccttcacaagggtcatcattgga
tcctcttctgagtaccgcatcaacaacaaggtggttggccttcctgattacagtgaggag
ctggaaaaacttggaattctgatcaaggctaggaattttctggtctttcagggagctgta
gagtcaattgccatgaagaaccccaaagagcgtaccgcgctttttgaggagatctcacgt
tctggagagctggcccaggaatatgaccggaggaaaaaagagatggtgaaagcagaagaa
gacacccagttcaattaccatcgcaagaaaaacattgctgccgagcgcaaagaagccaag
caggagaaagaggaggctgagaggtaccagcgccttaaagatgaagtagccagggccagc
gtgcagttacagctctttaagttgtatcacaacgagactgagatcgaaaagctgaacaaa
gagctaggtcagcggaacaaagaaattgagaaagaccgtaaaaagatggaccacgtggaa
gaagagctgaaggacaagaagaaggagctcggcaggatgatgagggagcagcagaccatt
gagaaagaaatcaaggagaaggattccgagttgaaccagaagaggccccagtacatcaaa
gccaaagagaatacatcccacaaaataaagaaactcgaggcagcaagaaaatcattacag
aacgcgcagaagatgtacaaaaagcgcaaagcagacatggatgagctggataaggagatg
agggcggtggagctggcaaagcaagagtttgaggaaagaatggaggaagaggcacaaagt
cagggccaggacctcacgctggaggaaaatcaggtcaagcaataccatcgtctaaaggaa
gaggccagtaagcgtgctgccactctggctcaggagctggaaaagttcaaccgtgaccag
aaggccgatcaggaccgccttgacttggaggagaggaagaaagtggagacggaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgagaaactggaggat
tatatcaccaccagcagacaatcgcttgatgaacagaagcgcatggaggaggagctgacg
gaggaagtggagatggccaagaggagaattgatgagattaacatggagcttaaccaggtt
atggaacaactaggagacgccagaatcgacaggcaggaaaatagtcgacagcagcgcaag
gcagagatcatggagagtatcaaaaggctctatcctggctctgtctatggccgtctgatt
gacctgtgtcagcccactcaaaagaagtatcagattgctgttaccaaagtgttgggcaag
aacatggacgccatcattgttgactcagagaagaccggcagagactgtattcaatacatc
aaggagcagagaggagagcctgagaccttccttcctcttgactaccttgaggtgaaacca
acagatgaaaagttgagagagctgcgaggagccaagctggtgattgatgttatccgctat
gagccgcctcacatcaagaaagccctacagtacgcttgtggcaacgctctggtttgtgag
aatgttgaggatgcacgaaggattgcttttggaggaccttacagacacaagacggtggcc
ttggatgggactttgttccagaagtctggtgtcatctctggaggagccagtgatctgaaa
gccaaggcgagacgttgggatgaaaaagcagtggacaaactgaaagagaaaaaggaaaaa
cttacagatgagctgaaggagcaaatgaaggccaagaggaaggaggcagaactacgtcag
gtgcaatctcaggcacatggtctgcagatgagactgaagtactctcagagtgatctggag
cagacgaaaaccagacacctgtccctcaacatgcaggaaaagtccaaactggagagcgaa
cttgcaaattttggccctcgcatcaatgacatcaaacggatcattcagtcccgcgaacga
gaaatcactgacctccgggaccgcatgaacctggtggaggatgaggtgtttgtggaattc
tgtaaggagattggagtgaggaacatccgagaatttgaggaggagaaagtgaagaggcag
aacgagattgctaagaaacgtcttgagtttgagacccagaagacccgcctgggaatccag
gtggactatgagaagaaccaactgaaagaggatcaggagaaggtcatgatgtgggagcaa
actgttaaaaaagatgaagctgaaatagaacgactaaagaaggaggagcacagacacatg
aaaatcattgatgagacgatggcccagctacaggacctgaagaaccagcacctcactaag
aaatccgaggttaatgataaaaatcatgaaatggaggagatccgtaaaaaacttggaggc
gccaacaaagagttgactcagctccagaaggaggtgactgccattgagaccaaactggag
cagaagcgtagcgaccgtcacaatctgctgcaggcctgcaaaatgcaggatatcaggttg
ccgcttcgctctggaacaatggatgacatcagccaaggagaggggagctcccagacagat
gagtccagcagccagaggacatccagcagtgttctggctaaagaagckctaatagagatc
gactacagcatcttatctgaagacttgaaggatgcattgtcagaggaagagataaaggca
gagacgaacacgctgcagcagcgtctgaatgaacagcagagtatcctgcagaggatcagt
gcacccaacatgaaagccatggaaaaactggagagtgtccgggacaagttccaggagacc
agtgatgagttcgaggctgcccgtaagagagccaaaaaggccaagcaagcctttgagcaa
atcaaaaaggagcgctttgatcgttttaatacctgttttgagtctgtggccacaaacaty
gatgagatctacaaggcgctctcacgcaacagcagtgctcaggcttttctaggcccagaa
aacccagaagaaccatatctagatggtatcaactataactgtgtagctccagggaagagg
ttcagaccgatggataacctgtcaggaggagagaagacggttgctgccctggctctgctc
tttgctattcacagctacaaaccggcccccttctttgttctggatgagattgatgccgct
ctggacaatactaacatcggcaaggtggccaattacatcaaggaccagtccatgcagaac
ttccaggccgtcgtcatttctctgaaggaggagttctacaccaaggcagactcactcatc
ggtgtttatccagagcaaggagattgtgtcatcagcaaagttctcacctttgacctctca
cagtatccagatgccagctcaagcacaaatgattaa

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