Austrofundulus limnaeus (annual killifish): 106531403
Help
Entry
106531403 CDS
T06063
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03082
ATP-dependent chromatin remodeling
alim03083
Polycomb repressive complex
alim04110
Cell cycle
alim04330
Notch signaling pathway
alim04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106531403
03083 Polycomb repressive complex
106531403
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106531403
04350 TGF-beta signaling pathway
106531403
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106531403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106531403
Enzymes [BR:
alim01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106531403
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106531403
HDAC complexes
Sin3A-HDAC complex
106531403
BRAF-HDAC complex
106531403
REST complex
106531403
SHIP complex
106531403
MiDAC complex
106531403
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106531403
Heterochromatin formation proteins
Other heterochromatin formation proteins
106531403
Chromatin remodeling factors
NuRD complex
106531403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Glypican
Motif
Other DBs
NCBI-GeneID:
106531403
NCBI-ProteinID:
XP_013882726
UniProt:
A0A2I4CRW5
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTFETAVALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNASNHKKTKRLKKEEEKEGEEKKEVKEEDKEEEKMDTSGPKEEMK
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattactacgacggtgatgtggga
aactattactacggccaaggccatcccatgaaaccccacagaatccgtatgacgcacaac
ctcctcctcaactatggactttacagaaaaatggaaatctatagaccacacaaagccagt
gctgaggagatgacaaagtaccacagtgacgactacatcaagttcctgaggtccatccgc
ccagacaacatgtctgagtacagcaaacagatgcagagatttaatgttggggaggactgt
ccagtgtttgatggactatttgagttttgtcagctgtcaaccggtggttctgtagccgga
gcagtgaagctgaacaagcagcagacagacatcgccatcaactgggccggtgggctccac
cacgccaagaagtctgaggcgtctggtttctgctacgtcaacgacatcgtcctcgccatc
ctggagctcctcaaataccaccagagggtgttgtacatagatatcgacatccaccatggt
gatggagtagaggaggccttttacaccacagacagagtcatgaccgtctctttccacaaa
tatggagagtactttcctggcactggagacctgagggacatcggagcaggaaaggggaag
tactacgctgtgaactaccctcttagagatggcatcgatgatgagtcgtacgaagccatt
ttcaagcccatcatggccaaagtgatggaaatgtaccagccgagcgctgtggttctgcag
tgtggagcggattctctttctggagacaggctgggctgcttcaacctcactattaaaggt
cacgcgaagtgtgtcgagtacataaaaagcttcaaccttcctctgctgatgctgggcgga
ggagggtacaccatccgcaacgtggcgcgctgctggaccttcgaaacggccgtggccttg
gactgctccatccccaacgagctgccctacaacgattacttcgagtacttcggacccgat
ttcaagctgcacatcagcccctccaacatgaccaaccagaacaccaacgagtacctggag
aagatcaaacagcggctctttgaaaacctccgcatgctgcctcatgctcccggcgtccag
atgcaggccatcccagaggacgcccctcacccggacagcggagatgaagatgaggaagac
cctgacaagcgcgtctctatccgcgcccatgataagaggatagcctgcgaggaggaattt
tcagactcggaggatgaagccgaggggcagggtgggggccgcaggaatgcttcgaaccac
aaaaagacgaaaagattgaagaaggaagaagagaaagaaggagaggaaaagaaagaagtg
aaagaagaagacaaagaggaagagaaaatggatacatcaggaccaaaagaagaaatgaag
accacttga
DBGET
integrated database retrieval system
