Austrofundulus limnaeus (annual killifish): 106532631
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Entry
106532631 CDS
T06063
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alim03016
]
106532631 (tsen34)
Enzymes [BR:
alim01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
106532631 (tsen34)
Transfer RNA biogenesis [BR:
alim03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
106532631 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
SCAI
Motif
Other DBs
NCBI-GeneID:
106532631
NCBI-ProteinID:
XP_013884195
UniProt:
A0A2I4CW41
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MEGQDQDQEDQGQDQDQDQEDQGQDQDQDQGQDQEERDQEKRPARVVGLSLCDSAPLLWR
AQDLRTVRSLGLVGALLGSLPRTPRQNIRLGRPLLLLPEEERLLREEGAAVLPEQNQDVV
GVAPAEGAGPQQQYEEEQQRSFQQQSALALEDRKSALLRAMTSSPAGSGSGTGSNETLQR
LLLDLHQNFTFPRSALAVQLSTSRAGLSYCPEARSFLQASWPIRAQDEPRSQARYQVFRD
LRGRGFFLTSAGKFGGDFLVYPGDPLRFHAHFIAVCVSLDESMCLLDVLAVARLGSNVKK
TVLLCSPAPDGPVRYTSLQWSGMM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggaccaggaccaggaggaccagggtcaggaccaggaccaggaccaggag
gaccagggtcaggaccaggaccaggaccagggtcaggaccaagaagagcgagaccaggag
aagaggccagcccgcgtggtgggcctgagtctctgtgactccgcccccttgttgtggcgg
gcccaggacctgaggacggtccggtctctgggtctggtgggggcgctgctgggctcgttg
cccagaaccccccgacagaacatccgactgggmcgacccctgctgctgctgccagaggag
gagaggctgctgagagaggagggagctgctgtcctccctgaacagaaccaggatgtagtg
ggcgtggctccagcagagggggcggggcctcagcagcagtatgaggaggagcagcagagg
agcttccagcagcagagcgctctcgctctggaggacaggaagtcggctctgctccgagcg
atgacatcatcacctgcagggtcagggtctggtaccgggtccaacgagaccctgcagcgc
ctcctgctggacctccatcagaacttcaccttccctcgttcggcgctggcggtccagctg
agcacgtcgagggcggggctcagctactgccccgaggcccgctccttcctgcaggccagc
tggccaatcagagcgcaggatgagccccgcagccaggcccggtaccaggtgttcagagac
ctgcgagggcggggcttcttcctcacctctgcagggaagtttggaggcgacttcctggtg
tacccaggtgacccgctgcgtttccacgcccacttcatcgccgtgtgcgtgtctctggac
gagtccatgtgcctgctggacgtcctcgccgtggcccggctgggctccaacgtgaagaag
accgtcctgctgtgctcgccggcgccggacggacctgtccgctacacgtctctacagtgg
agcggcatgatgtga
DBGET
integrated database retrieval system
