Austrofundulus limnaeus (annual killifish): 106536910
Entry
106536910 CDS
T06063
Gene name
ercc5
Definition
(RefSeq) DNA repair protein complementing XP-G cells
KO
K10846
DNA excision repair protein ERCC-5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106536910 (ercc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106536910 (ercc5)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
106536910 (ercc5)
SSDB
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
Other DBs
NCBI-GeneID:
106536910
NCBI-ProteinID:
XP_013889706
UniProt:
A0A2I4DBT9
LinkDB
Position
Unknown
AA seq
1067 aa
MGVHGLWRLLESTGKPINPETLEGKILAVDISIWLNQAVKGVRDRQGNSVQNAHLLTLFH
RVCKLLFFRIRPVFVFDGDAPLLKKQTLALRRQRKEELTRESKQTNEKLLKTFLKRQAIK
AALGDQSKDPLPSISGVRRNEVDDMYILPALPPAEEKERSSSEEEEEKEGNELSDSYHMY
QEELYEDPNSVDINSEEFSSLPAEMKHEILKEMKDFCKRRRTMIHKPPERSGEFSQYQLA
GLLQRNRLNQRLEGVEREMSHRSAAGAPQLGQEDGDQRSHSVESNRLVSEDHSHYILIKG
SKKSEAASESQPAASPWAGSSLSGCRRAADKPKPLWRPVAEEEEEVQASSSKETSESKPL
QEDACPASPRTLEAIQAALNDCSDDDDEEEDGRVSPRTLLAIQQALTEEEDGTSISPAKP
RTSPPRPVVIGSSDEESRPVPEESSDFPTNAAQSVHMEDSLLDSSSEEELEEVVEQRNKA
FRLAALPRAEEEEEERTREAEEREELKEKASNQNSPNVSPSSRTSWNPGGTETNAPPGNP
EEKSAEETNGDKVKMDSGSEESFIEVPEEEVEEEDAADSDAVGDKRSSEEADKDVTITDD
ESGGSLTEVLQGPTTAXSSEEEKEEESETQNQENELKEGTEADSKTTGTSEWDHIDVGEL
EALESSLGLEQDSLTEQKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPMEAEAQCAA
LDRADQTHGTITDDSDVWLFGGRHVFKNFFSQNKYVEHYQFSDLQSQLGLDRTKLINLAY
LLGSDYTEGVPGVGYVTGMEILNEFPGPALEPLIQFSQWWSEAQENKRLVADPRDTKVKK
KLRDLKVQPGFPNPAVAQAYLEPVVDQSDASFSWGLPQLDMMKEFCLSRFGWSSRKTEEI
LQPVIKQLNSQQTQLRIDSFFRLEQQEKQSIRSQRLRRAVTCLKRKERGGGGGEDEGSEE
EIKSKKTSVKTTERQKEDVRSAAGGGFLGSELTDEPPLLPLKDICGSGPDSGGRSIKTRP
EKTRSSSSSSSDDDDDKKAAMVTARSVFEGSKRGRGGKRPRGKGKKH
NT seq
3204 nt
+upstream
nt +downstream
nt
atgggagttcacggactgtggaggctgctggagagcacagggaaacccatcaatcctgag
actctggagggaaagatccttgctgttgacatcagcatctggttaaaccaagcagtgaag
ggggtgagggaccgccagggcaacagtgtccagaacgcccatctcctcactctcttccac
cgcgtctgtaagctgctcttcttccgcatcagaccggtctttgtgttcgacggagatgct
cctctgctgaaaaaacagaccctggctctgaggaggcagaggaaggaggagctgacccgc
gagtccaaacaaaccaacgagaaactcctcaagaccttcctgaagagacaagccatcaaa
gctgcccttggagatcaaagcaaggaccctctgcccagcatctcaggcgtcaggaggaac
gaggtggacgacatgtacattctgcccgcccttccacctgcagaggagaaggagagaagc
agctcagaggaagaagaggagaaagaaggaaacgagttgagtgacagttatcacatgtat
caggaagaactgtacgaagacccaaactctgtggacatcaactccgaggagttctccagc
ctgcccgccgagatgaaacacgagatcctgaaagaaatgaaggacttctgtaaaagacgc
aggaccatgattcacaaacctccagagcgctcaggagagttttctcagtaccagctggcc
ggcctgctgcagaggaaccggctgaaccagcgcctggagggggtggagcgagagatgagc
caccgcagcgccgccggcgcgccacagctcggccaggaggacggagaccagcggagtcac
agcgtggagtcaaaccgactggtttcagaagaccactcgcattacattctcattaaaggc
tccaaaaagtctgaagctgcctcagagagccagcctgcagcctcgccctgggccgggagc
tccctgtccggctgcaggagagcggcagacaaacccaaacctttgtggcgacctgtcgct
gaggaagaggaggaggtacaggcctcttcgtcaaaggagacctctgagtcaaaaccactt
caggaagacgcctgtccagcttcacctcggactctggaggccatccaggctgccctgaac
gattgctccgatgatgatgatgaagaggaggatggacgggtatctcctcgtacgctcctg
gcaatccagcaagctttaaccgaggaagaggacgggacaagcatctcacctgccaaaccg
aggacaagtcctcctcgtcccgtggtcattggcagctcagacgaggagagccggcctgtc
cctgaagaatcgtcagattttccaacgaatgccgcccagagcgtccacatggaggacagc
ctgctcgacagcagctctgaggaggagctggaggaagtggtcgaacagagaaacaaagcc
tttcgattggctgcgctgccacgagcygaggaggaggaggaggagcggacgagagaggcg
gaggaacgggaggagctgaaggagaaagcgtccaatcagaactcaccgaatgttagtccc
tcctctcggacaagttggaacccaggcggcacagaaacaaacgctcctcctggaaacccg
gaggagaagagtgccgaagagacgaacggagacaaggtgaaaatggacagcgggtctgaa
gagagtttcatcgaggtgccagaagaggaagtcgaagaggaggacgcagctgattcagac
gctgttggagacaaaagatcttcagaagaagccgataaagacgtgacgattacagacgac
gagtcgggtggaagtttaaccgaggttctccagggtccaactactgctrggagttcagag
gaggaaaaagaggaggaatcagagactcaaaatcaagagaacgagctgaaagagggaaca
gaggcagactctaaaacaacaggaaccagtgagtgggaccacatcgacgtgggtgaactg
gaggctctggagagctcgttagggttggagcaggacagcctgacggagcagaaacagcag
caggaacgaatggcgaacaccgtcaccggacagatgtacctggaaagtcaggagctgctg
cggctgttcggcgtgccgttcctggtggcgccaatggaggccgaagctcagtgcgcggcg
ctggaccgcgccgaccagacgcacgggaccatcacggacgactcggacgtgtggctgttc
ggaggaagacacgtgttcaagaacttcttcagccagaacaaatacgtggagcactaccag
ttcagtgacctgcagagccagctgggtctggacagaactaaattaataaatctggcctac
ctgctcggcagcgattacactgaaggtgtaccgggagtcggatatgtgacgggcatggag
atcctgaacgagtttccaggtccagctttggagccactaatacagttcagtcagtggtgg
tcagaggctcaggagaacaaacggctggtggctgatccccgagacaccaaggtgaagaag
aaactccgggatctgaaggtccaacctggcttcccgaacccggccgtggcccaggcgtac
ctggaacctgttgtggatcagtcagacgcctcgttcagctggggactcccccaactggac
atgatgaaagagttctgcctgagtcgattcggttggagcagccgaaagacggaggagatc
cttcaacctgtgatcaaacagctgaacagccagcagactcagctgagaatagactccttc
ttccgcctggagcagcaggagaagcaatcgattcgcagccagcgactccgccgagccgtc
acctgcttaaagaggaaggagagaggaggaggaggaggagaggacgaaggcagcgaggag
gaaatcaagtctaagaaaacaagcgtgaagaccacagagaggcagaaagaagatgtcaga
tccgcggcaggcggggggtttctaggttctgagctcacagatgaacctcctcttctgcca
ctgaaggacatctgcggttctggtccggattctggcggtcggtccatcaagactcggcct
gagaagaccaggagcagcagcagcagctccagtgatgatgatgatgataagaaagctgcc
atggttacggcccgatccgttttcgagggcagcaaacgaggtcgtggaggaaaacgaccg
agaggaaaaggaaagaagcattaa
DBGET
integrated database retrieval system
