Poseidonibacter lekithochrous: ALEK_0898
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Entry
ALEK_0898 CDS
T06860
Name
(GenBank) RND family efflux system, outer membrane channel protein, TolC family
KO
K12340
outer membrane protein
Organism
alk
Poseidonibacter lekithochrous
Pathway
alk01501
beta-Lactam resistance
alk01503
Cationic antimicrobial peptide (CAMP) resistance
alk02020
Two-component system
alk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
alk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ALEK_0898
09132 Signal transduction
02020 Two-component system
ALEK_0898
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ALEK_0898
01503 Cationic antimicrobial peptide (CAMP) resistance
ALEK_0898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alk02000
]
ALEK_0898
02044 Secretion system [BR:
alk02044
]
ALEK_0898
01504 Antimicrobial resistance genes [BR:
alk01504
]
ALEK_0898
Transporters [BR:
alk02000
]
Other transporters
Pores ion channels [TC:
1
]
ALEK_0898
Secretion system [BR:
alk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
ALEK_0898
RTX toxin transporter
ALEK_0898
Multiple protein transporter
ALEK_0898
RaxAB-RaxC type I secretion system protein
ALEK_0898
Antimicrobial resistance genes [BR:
alk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
ALEK_0898
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
ALEK_0898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Tn916-Xis
Motif
Other DBs
NCBI-ProteinID:
QKJ22179
LinkDB
All DBs
Position
919753..921012
Genome browser
AA seq
419 aa
AA seq
DB search
MRRIKNKLLTLSLAASFFAVGANALNLDEAVNIALEKNNDLQIQNFDYIESIQNVKANNA
NFLPKLDLAYGYNNRDKVNATQTKEDGTLSAKISYNLFNGFKDVATKKSSKYLSESSKYS
LEALKQDTVLNTKNAYINYLDKVNAQETYESEYTLFEKQYTDAQNKYDQGLVARNDLLQV
QVNMSSAKQNVVRAKADVKIAKLELSNILGGMNLKGETIEPLHEKNLNIKTYDENILDQR
SEIQALKMSLESVRNQQKATKGSFYPKLDASFSHNRFYDDLGFDEVDSGIDNQNVANLSA
SWNLYNGGSDDNQIAIYKTRMSKLKTQLVKTSLDIKLQYENAKSDLEVANDNYETATLSL
AQAKENYNIVSNRFNEGISSSTDLTDANFLLTSAKQRFSRAYFDKYLSIATLHRIVEAK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaataaaaaacaaattattaactctatcactagcggcatctttctttgccgtt
ggtgctaatgctttgaatttagatgaagctgtaaatattgcattagaaaagaataatgac
ttacaaattcaaaactttgattatattgagtcaattcaaaatgtaaaagcaaataatgct
aattttttacctaagttagatttagcttacggttataataatagagataaagttaatgca
acacaaacaaaagaagatggtactttaagtgcaaaaatttcttataatttatttaatgga
tttaaagatgttgcaacaaaaaaatcatcaaaatatttatctgaatcatcaaagtattct
ttagaagctttaaaacaagatacagtattaaatacaaaaaatgcatatattaactatctt
gataaagttaatgcgcaagaaacttatgagagtgaatatacattatttgagaaacaatat
acagatgctcaaaataaatatgatcaaggtttagtagctagaaatgatttattacaagtt
caagtaaatatgtctagtgcaaaacaaaatgttgtaagagctaaagcagatgttaaaatt
gctaaattagagttatctaatattttaggtggtatgaatttaaagggtgaaactattgaa
cctttacatgaaaaaaacctaaatattaaaacttatgatgaaaatattttagatcaaaga
agtgaaatccaagctttaaaaatgagtttagaatcagtacgaaatcaacaaaaagcaact
aagggatctttttaccctaagttagatgcttctttttctcataatagattttatgatgat
ttagggtttgatgaggtagattctggaattgataatcaaaatgttgcaaatttaagtgca
tcatggaatttatataatggtggaagtgatgataatcaaattgccatttataaaacaaga
atgtctaaactaaaaacacaattagtaaaaacatcacttgatattaaattacagtatgaa
aatgctaaatcagatttagaagttgcaaatgataattacgaaacagctacattatcatta
gcacaagcaaaagaaaattataatatagttagcaatagatttaatgaaggtatctcaagt
agtactgatttaactgatgcaaacttcttattaacatcagcaaaacaaagatttagtaga
gcatattttgataagtatttatcaattgcaacattacatagaattgtagaggcaaaataa
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