Alkalibacter rhizosphaerae: J0B03_02330
Help
Entry
J0B03_02330 CDS
T07100
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
alka
Alkalibacter rhizosphaerae
Pathway
alka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J0B03_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alka03400
]
J0B03_02330
Enzymes [BR:
alka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J0B03_02330
DNA repair and recombination proteins [BR:
alka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J0B03_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
HROB
DUF5766
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QSX08938
UniProt:
A0A974XFM2
LinkDB
All DBs
Position
complement(466631..467839)
Genome browser
AA seq
402 aa
AA seq
DB search
MKQRVMSVGKLTKYIKTIFENDPILRNVLVEGEISNFKLHSSGHAYFSLKDGEGRIQCVM
FRNVAVQAPDLKDGDQVILRGSVSVYEKNGQYQLYVQQCEKKGLGDLYVEFEKMKTALDA
LGWFDRDRKKDLPYLPHSIGIVTSPTGAAIRDMITVITRRFPNMEIQLYPVSVQGDRAPG
EISQAIDFFNDQKEVEVIIVGRGGGSIEELWAFNERIVAESIHRSRIPVISAVGHETDFT
ISDFVADLRAPTPSAAGELAVPSMEEQKQRLHQFKKRLTTDAIAKLKYQKDRIHRLKNSY
YFGKPEMFYVQNIQRLDVLQSQLTDRFHEYLTKETNRIGALELKLKGYDPQSILRRGYAA
VKNQEGDFVTGPQDLNVGDPVELVFASGSATAKIIGKGSEKS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcgagtgatgagcgtcgggaaactgacgaaatacattaaaacaatttttgaa
aatgacccgatcctgcgaaacgttttagtggaaggggaaatttccaatttcaagcttcat
tcttccggccatgcctattttagtctgaaggatggagaaggaaggatccagtgcgtcatg
tttcgaaatgtggctgttcaagctccggatctaaaggatggagaccaggtcattcttcgc
ggaagcgtcagcgtttatgaaaaaaatggtcaatatcagctctacgtacagcagtgtgaa
aaaaagggattgggtgacttgtatgtagagtttgaaaaaatgaagacagcgttggacgcc
ttggggtggtttgacagggatcgaaaaaaagacttgccctaccttcctcattccattggc
atcgttacttcgcctacgggggccgccattcgggacatgatcacggtgatcacccgaagg
tttccaaacatggagatccaattgtatccggtgtccgttcagggagatcgggctccggga
gaaataagccaagccatcgacttttttaatgatcagaaagaagtggaagtgatcatcgtt
ggaagaggtggtggatccatagaagagttgtgggcgttcaacgaacggatcgttgcagaa
agcatccatcgatcgaggataccggtcatcagtgccgtaggtcatgaaacggattttacc
atttcagattttgtagcagatctgcgggcacctactccctccgcagcaggagaactggcg
gtgccttccatggaggagcaaaaacaacggctccatcagtttaaaaagaggctgaccacc
gatgccattgccaagctcaagtatcaaaaggatcggatccatcgtttaaaaaacagctat
tattttggaaaaccggagatgttttatgttcaaaacatacaacggctggatgtattgcaa
tcgcaattgacggatcgctttcacgaatatctgacgaaagagacgaatcgtattggagca
ttggaactgaaattgaagggatatgatccccaatccattttacgtcgtggttatgcagca
gttaaaaatcaagaaggtgattttgtcaccggtccacaggacttgaacgtgggagatccg
gtagagctggtatttgcatccggcagtgcaacggcaaaaatcatcggaaaaggaagtgaa
aaatcatga
DBGET
integrated database retrieval system
