KEGG   Alloactinosynnema sp. L-07: CRK55378
Entry
CRK55378          CDS       T04489                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
alo  Alloactinosynnema sp. L-07
Pathway
alo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:alo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CRK55378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alo03400]
    CRK55378
Enzymes [BR:alo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CRK55378
DNA repair and recombination proteins [BR:alo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CRK55378
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS TetR_C_25
Other DBs
NCBI-ProteinID: CRK55378
UniProt: A0A0H5CDN5
LinkDB
Position
I:389807..390613
AA seq 268 aa
MPEGHTLHRLARSHQKRFGGTAVEVSSPQGRFAAGASLVDGQVLRRAEAHGKHLFHVYGP
ETIVHVHLGLYGTFDETPLPALAPVGQVRMRLVGPTHWADLRGPTACEVLTRAEAKAVRD
RLGPDPLRRDADPDRAWTRISRSRTPLAVSLMDQAVIAGVGNVFRAELLFRHGVHPLTPG
TVLDRTLWTDMWTDLIDLMRLGVRRGRIDTVRDEHLPKATGRAPRVDRHGGEVYVYRRAG
MPCHVCGTEVAGQVLAARNLFWCPTCQA
NT seq 807 nt   +upstreamnt  +downstreamnt
atgccagaaggccacaccctgcaccggctcgcccggtcgcaccagaaacgcttcggcggc
accgccgtcgaggtctccagcccacagggacgcttcgccgccggagcgtcccttgtggac
ggacaggtgctccgccgggccgaggcgcacggcaagcacctgttccacgtctacggcccc
gagaccatcgtgcacgtccacctcggtctctacggcacgttcgatgagacacccctgccc
gcgctcgcgcccgtcggccaggtccgcatgcgcctggtcggcccgacccactgggccgac
ctgcgcgggccgacggcctgtgaggtgctgacccgcgccgaggccaaggccgtccgcgac
cggcttggcccggacccgctgcgccgcgacgccgacccggaccgcgcgtggacgcggatc
tccaggtcccgcacgccgctggcggtgtccttgatggaccaggccgtgatcgcgggcgtg
ggcaacgtgttccgcgccgaactgctgttccgccacggcgtccacccgctcacccccggc
acggtgctcgaccggacactgtggacggacatgtggacggacctgatcgacctcatgcga
ctgggtgtgcgccgcggccgcatcgacaccgtccgcgacgagcatctgcccaaggccacc
ggccgcgcaccccgggtggaccgccacggcggcgaggtctacgtctaccggcgcgccgga
atgccctgccatgtttgtggaaccgaggtcgcgggccaggtcctagcggcccgcaacctc
ttttggtgccccacctgccaggcctag

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