KEGG   Alloactinosynnema sp. L-07: CRK55739
Entry
CRK55739          CDS       T04489                                 
Name
(GenBank) Probable ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
alo  Alloactinosynnema sp. L-07
Brite
KEGG Orthology (KO) [BR:alo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alo03400]
    CRK55739
Enzymes [BR:alo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CRK55739
    5.6.2.6  RNA 3'-5' helicase
     CRK55739
DNA repair and recombination proteins [BR:alo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CRK55739
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII DUF6406 AAA_25 Lhr_WH Mg_chelatase AAA_22
Other DBs
NCBI-ProteinID: CRK55739
UniProt: A0A0H5CE50
LinkDB
Position
I:complement(716053..720621)
AA seq 1522 aa
MTENALDLFSPATRQWFAGAFVAPTDAQTGAWRAAAAGEHALVVAPTGSGKTLAAFLWAL
DRLAAEGPPVDAKHRCRVLYVSPLKALAVDVQRNLRAPLAGIRQAAHRLDLPEPDITVGM
RTGDTPADERRAFARTPPDVLVTTPESLFLLLTSAARESLRGVRTVIVDEVHAVAGVKRG
SHLALSLERLDALLDRPAQRIGLSATVRPVDEVSGFLGGGRPVTLVQPKIGKTIEVRVEV
PTEDMAALVEQVNDDAADRTPASIWPKVERRVLELVRRHRSTIVFANSRRLAERMTARLN
ELAAEEPNEPARFPAEAIGQSGMTTMAAPVIARAHHGSMSKEQRTLVEEDLKSGRLACVV
ATSSLELGIDMGAVDLVVQVEAPPTVASGLQRVGRAGHQVGAVSRGVMFPKFRGDLVSCA
VVAERMAQGAIEAVRYPRNPLDVLAQHIVAMVAIEPWTVTELATLVRRAAPFASLPDAAL
YAVLDMLAGRYPSEEFGELRPRVTWDRISGELRGRPGAQRLAVTSGGTIPDRGLFTVMTP
PDERGAGSRVGELDEEMVYESRVGDTFLLGTSSWRVQDITHDRVIVTPAPGEAARMPFWK
GDAPGRPLELGRALGGFVRELSSMDTQAARERAAAAGLDEWAIDNLMAYLGEQREATRHV
PDDRTILVERFRDELGDWRLVVHSPFGAQVNAPWALAIGARLRERRGVDAQIAHGDDGIV
IRLPDTVDDAGQEIVAGAEDVLLDPDEVEQIVVAEVSGSALFAARFRECAARSLLLPRRD
PRRRTPLWQQRQRSAQLLSVAAKYEQFPVVLEAMRECLQDVYDVAGLRELMSDVRSRRVR
VVDVQTQSASPFARSLLFGYVGMFLYATDVPLAERRAAALSLDSALLAELLGSEAIRELL
DPDVLAEVERSLQRLDPGRHARHAEDAADLLRFLGDLSVEEAGLRGVEPDWLAELESTRR
ALRVRIAGDERFIAIEDAGRVRDALGTALPVGVPEVFTEPVADPLGDLLSRYARTHGPFA
AAEAAARFGLGTSVVTGVLERLAGSGRLVRGELRPITGPEPPAAVEYCDAEVLRRLRRSS
LARLRAEVEPVEPAALGRFLPSWHGIGRKTRSFATADDVLSIVEQLAGAPIPASALESLV
LPSRLPGYSPALLDELTAAGEVTWCGTGALAGGDGWIALAPADVADLLLPDIEDAVPDTP
LHTAVLSALDGGALFFRQVADRAGAILLDGGAEAPADPDIVAAVWDLVWGGLITNDTIAP
LRALVSGKGAAHRPRRTAPRGRYARLRTARPAMPSRTGPPTVGGRWSLVMPREEDPTRRA
HARAEAFLERHGVLTRGALDTERVTGGFSGIYKVLRAMEESGQIIRGYVVEGLGAAQFAA
RGAVDRLRALSRSDTPGTDPAEATVLAAADPAQPYGAALPWPEPLGEGKHRPGRKAGALV
VLVDGTPALYVERGGRSLLSFTETDTALRSAAEALSRAVHDGWLGSLSVQKADGEVALTS
ALADVLRDAGFRATPKGLRLRA
NT seq 4569 nt   +upstreamnt  +downstreamnt
atgaccgagaacgcgctcgacctgttctcacccgcgacaaggcagtggttcgcgggtgcg
ttcgtcgcgccgaccgacgcccagaccggggcgtggcgggcggcggcggcgggcgaacac
gcactggtcgtggcaccgaccggatcgggcaagacgctggcggcgttcctgtgggcgctc
gaccggctcgccgccgagggcccacccgtcgacgccaagcaccggtgccgggtgctctat
gtgtcgccgctcaaggcactggcggtcgacgtccagcgcaacctgcgcgccccgctggcg
ggcatccggcaggccgcgcaccggctggacctgcccgagccggacatcaccgtcggcatg
cggaccggcgacaccccggccgacgagcgacgtgccttcgccaggaccccgccggacgtg
ctggtcaccacgccggagtcgctgttcctgctgttgacctcggcggccagggagtcgctg
cgcggagtgcggacggtgatcgtcgacgaggtgcacgcggtcgccggggtcaagcgcggg
tcgcacctggcgctgtcgctggaacggctcgacgccctgctcgaccggcccgcccagcgg
atcgggctgtcggcgacagtgcggccggtggacgaggtcagcgggttcctcggcggcggg
cggccggtgacgctcgtgcagcccaagatcggcaagaccatcgaggtgcgggtcgaggtg
ccgaccgaggacatggcggccctggtcgagcaggtcaacgacgacgccgccgaccggacc
ccggcatcgatctggccgaaggtcgagcggcgggtgctggagctggtccggcgacatcgg
tccacgatcgtcttcgccaactcgcggcggctggccgagcggatgacggcccggctcaac
gagttggccgccgaggagccgaacgagcccgcccggttccctgccgaggcgatcggccag
tccgggatgacgacgatggccgccccggtgatcgcccgcgcccaccacgggtccatgtcg
aaggagcagcggaccctggtcgaggaggacctcaagtccgggcggctggcgtgcgtggtc
gcgacgtcctcgctggagctgggcatcgacatgggcgcggtcgacctggtggtgcaggtg
gaggcgccgccgacggtcgcgtccgggctgcaacgcgtcggccgcgcgggccaccaggtc
ggcgcggtgtcgcgcggggtgatgttcccgaagttccgcggcgacctggtgtcctgcgcg
gtggtcgccgagcggatggcccagggcgcgatcgaggccgtgcggtacccgcgcaacccg
ctcgacgtgctggcccagcacatcgtggcgatggtggcgatcgagccgtggacggtgacc
gagctggccaccctggtccggcgcgcggccccgttcgcctcgctgcccgacgccgccctc
tacgccgtgctcgacatgctggccgggcgttatccgagcgaggagttcggcgagctgcgg
ccccgggtcacctgggaccggatcagcggcgagctgcgcggtcggccgggggcgcagcgg
ctcgcggtcacctcgggcggcacgatccccgaccgcggcctgttcaccgtgatgaccccg
ccagacgaacgcggcgcgggctcgcgggtcggcgaactggacgaggagatggtctacgag
tcgcgggtgggcgacacgttcctgctgggcacgtcgtcatggcgggtccaggacatcacc
cacgaccgagtgatcgtcacgcccgcgccgggtgaggccgcccggatgccgttctggaag
ggcgacgcgccggggcgcccgctggagttgggccgggcgctgggcggcttcgtccgcgag
ttgtccagtatggacactcaggcggcgcgcgagcgggctgcggcggcgggcctggacgaa
tgggcgatcgacaacctgatggcctacctgggcgaacagcgcgaggcaacgagacatgtg
cccgacgaccgcaccatcctggtcgagcgcttccgcgacgagctgggcgactggcggctg
gtggtgcactcgccgttcggcgcccaggtgaacgcgccgtgggcgctggcgatcggggcc
cggctgcgggagcggcgcggggtcgatgcccagatcgcccacggcgacgacggcatcgtc
atccggctgcccgacacggtggacgacgccgggcaggagatcgtcgcgggcgctgaggac
gtgctgctcgacccggatgaggtcgaacagatcgtggtggccgaggtgagcggctcggcg
ctgttcgccgcccggttccgcgagtgcgcggcacggtcgctgctgctgccccggcgtgat
ccgcgcaggcgcacgccgctgtggcagcaacggcagcgatcggcgcagctgctgtccgtc
gcggcgaagtacgagcagttcccggtcgtgctggaggccatgcgcgagtgcctgcaggac
gtctacgacgtggccggactgcgagagctgatgtccgacgtgcggtcgcggcgggtgcgg
gtggtcgatgtgcagacccagtccgcgtcgccgttcgcccgcagcctgctcttcggctac
gtcgggatgttcctctacgccaccgatgtcccgctggccgaacggcgggcggccgccctg
tcgctcgacagtgccctgctggccgagttgctgggctccgaggcgatccgcgaactgctc
gacccggacgtgctcgccgaggtcgagcggtcgctgcagcggctcgacccgggcagacac
gcccgccacgccgaggacgcagccgacctactgcgattcctcggcgacctgtccgtcgag
gaagcgggcctgcgcggcgtcgagccggactggctcgccgagcttgagtccacccggcgg
gcgctgcgggtgcgcatcgcgggcgacgagcggttcatcgccatcgaggacgcgggccgc
gtgcgcgacgccctgggcacggcgttgccggtcggggtgccggaggtgttcaccgagccg
gtcgccgacccgctgggcgacttgctgtcccgctacgcgcgcacccacggcccgttcgcc
gcggccgaggcggcggcgcggttcggcctgggcacgtcggtggtcaccggggtgctggaa
cgcctcgcgggcagcggcaggctggtccgcggcgaactgcgtccgatcaccggcccggag
ccacccgccgccgtcgagtactgcgacgccgaggtgctgcgacggctgcgccggtcgtcg
ctggccaggctgcgcgccgaggtcgagccggtcgagcccgccgcgctgggccggttcctg
ccgagctggcacgggatcggccgcaagacccgttcgttcgcgacggccgacgacgttctg
tccattgtggagcaactggcgggtgcgccgatcccggccagcgccctggagtccttggtc
ctgccgtcgcgactgcccggctactcccccgccctgctggacgaactgacagcggcgggc
gaggtcacctggtgcggcacgggcgcgctggccggtggcgacggctggatcgcgctcgcc
ccggccgatgtcgccgatctgctgctgcccgacatcgaggacgcggtgccggacaccccg
ctgcacaccgccgtattgtccgctttggacggtggagcgctgttcttccgccaggtcgcc
gaccgcgcgggcgccatcctgctcgacggcggcgccgaggcccccgccgacccggacatc
gtcgccgccgtgtgggacctggtgtggggcggcttgatcaccaacgacaccatcgccccg
ctgcgcgccctggtctccggcaagggcgccgctcaccgcccccgccgaaccgcgccccgc
ggccgctacgcccgcctgcgcaccgcgcgacccgccatgcccagccgcaccggcccgccc
acggtcggcggccggtggtcgctggtcatgccccgcgaggaagacccgacccgccgcgcc
cacgcccgcgccgaggccttcctcgaacgccacggcgtcctgacccgcggggcgttggac
accgagcgggtcaccggcggattcagcggcatctacaaagtcctgcgcgccatggaagag
tcaggccagatcatccgcggctacgtcgtcgagggcctcggcgccgcccagttcgccgcc
cgcggcgccgtcgaccgcctccgcgcactgtcccgttcggacaccccaggaaccgaccca
gccgaggcgacggtcctcgccgccgccgacccggcccagccctacggcgcggcactcccc
tggccggaaccgttgggagaagggaaacatcgccccggccgcaaagcaggcgccttggtc
gtcctggtcgacggcaccccagccctgtacgtcgaacgcggcggccggtccctgctgtcg
ttcaccgagaccgacaccgccctgcggtccgccgccgaagccctgtcccgagccgtccac
gacggctggctgggctccctctcagtccagaaagccgacggcgaggtcgcactcacctcg
gcgctggcagatgtcctgcgggatgcgggattccgcgccacaccgaagggattgcgcttg
agagcatga

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