Alloactinosynnema sp. L-07: CRK56364
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Entry
CRK56364 CDS
T04489
Name
(GenBank) G:T/U mismatch-specific uracil/thymine DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
alo
Alloactinosynnema sp. L-07
Pathway
alo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRK56364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alo03400
]
CRK56364
Enzymes [BR:
alo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CRK56364
DNA repair and recombination proteins [BR:
alo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CRK56364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CRK56364
UniProt:
A0A0H5CFY5
LinkDB
All DBs
Position
I:1362613..1363182
Genome browser
AA seq
189 aa
AA seq
DB search
MIEFWSHGWVSPPTREQLAAARDRTIPDVLGTDLTVLFCGINPSLYSAYTGHHFARPGNR
FWPALHQSGFTPRLLRPAEQHLLPGFGLGLTNLVARATARADEVSQDELAAGGERLSALV
EQYRPRTVAIVGVTAYRAAFGAREAVIGPQAAGLGSAELWMLPNPSGLNAHYQLGELAAE
FRTLRERTR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagttctggtcccatgggtgggtgtctccgcccacccgcgagcaactcgccgcc
gcccgcgaccgcaccattcccgacgtcctgggcaccgacctgactgtgttgttctgcggt
atcaacccgagcctgtactcggcctacaccggacaccacttcgcccgccccggcaaccgc
ttctggcccgcgctgcaccagtccggcttcaccccacgcctgctgcggcccgccgagcag
cacctcttgccgggcttcggcctcggcctgaccaacctcgtcgcccgagcgacggcgcgc
gccgacgaggtaagtcaagacgaactggccgcgggcggcgaacggctgagcgcgctggtc
gagcagtaccggccgcgcaccgtcgcgatcgtcggcgtgacggcctatcgggcggcgttc
ggtgcgcgggaagcggtgatcggcccgcaggcggcaggcctgggatcagccgagctgtgg
atgctgccgaatccgagcggcctcaacgcgcactaccaactcggggagttggccgccgag
ttccgcacgctgcgggagcggacccggtga
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