Poseidonibacter parvus: LPB137_04680
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Entry
LPB137_04680 CDS
T04722
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
alp
Poseidonibacter parvus
Pathway
alp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB137_04680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_04680
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB137_04680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
Get2_like
COG5_C
DUF6436
Motif
Other DBs
NCBI-ProteinID:
APW65188
UniProt:
A0A1P8KKV6
LinkDB
All DBs
Position
complement(952995..954839)
Genome browser
AA seq
614 aa
AA seq
DB search
MQLEEKLKQLPNDAGVYQYFDKDGRLLYIGKAKVLKNRVKSYFKFTPKLLPSDRLGPRIY
KMISEAFSIEWIVVPNEHDALILENSLIKQLKPKYNILLRDDKTYPYIYIDYSELYPRLE
ITRKVYKNKNIKYFGPYSTGSRDMLDSIYEIVPLVQKKSCIKGKEACLFHQIKRCHAPCE
GKITTGEYYKIVEEAIDYIYNKSKLIVKLQEKMLEYSEDFRFEEAMKLRDRIKTIEKSQI
KSGMDLATNENLDVFAIKASKQKAVIVRMFIRDGKLTSSSYDFIKVNFLEDETNIDLDEA
YKRAIVNYYDNEIPLLPKEILTAIDIEEKNDLEEFLYNRFEKRIKLVNPKKDKKKDLIQI
ALNNCDELLRIDSSRNQSTIYEELQKLFNLQILPHRVETYDNSHMMGQATVGAMVVWNEE
LNAFDKKDFRHYNLESKDEYSQMREILMRRVDSFEKNPAPDLWILDGGSALLKLAYDIIN
STGVNLDIIAIAKEKVDAKAHRAKGAAKDIVHYKDEKGEYRSLKLETSDQRLQFVQRQRD
EAHRFVISFHKKQKRKEDKQISLLQIKGIGEAKVKKLLLYFGEFEKIRNASIEELKEVLN
EKDAIVISTYFKEE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagaagaaaaactaaaacaattaccaaatgatgctggcgtttatcaatacttc
gataaagatggaagactactatatataggaaaagcaaaagtactaaaaaatagagttaaa
tcttactttaaatttacaccaaaactacttccttctgatagattaggtcctagaatttat
aaaatgataagtgaagcttttagtattgagtggattgtagtaccaaatgaacatgatgca
ttaattttagaaaattctttaattaaacaactaaaaccaaagtacaatattttacttcgt
gatgataaaacctatccatacatttacatagattactcagaactttaccctagacttgaa
attacaagaaaagtttataaaaataaaaatattaaatattttggaccctattctactggc
tctcgtgatatgcttgatagtatttatgaaatagttcctttagttcaaaaaaaatcatgt
ataaaaggaaaagaagcatgtttatttcatcagattaaaaggtgtcatgcaccttgtgaa
ggtaaaataacaacaggtgagtattataaaatagttgaagaagctattgattatatttat
aataaatcaaaattaattgtaaaacttcaagaaaaaatgcttgaatactctgaagatttt
agatttgaagaagcaatgaaacttcgagatagaattaaaacaattgaaaaatcacaaata
aaatcaggtatggacctagcaacaaatgaaaatcttgatgtatttgcaataaaagcatca
aaacaaaaagctgtaatagtaagaatgtttataagagatggaaaactaacctcttcttct
tatgattttataaaagtaaattttttagaagatgaaactaatattgatttagatgaagca
tataaaagagctattgtaaattattatgacaatgaaattccattattaccaaaagagatt
ttaacagcaattgatattgaagaaaaaaatgacttagaagagtttttatacaatagattt
gaaaaaagaataaaactagttaatcctaagaaagataagaaaaaagatttaattcaaatt
gcacttaacaattgtgatgaactccttagaattgattcctctagaaatcaaagtactata
tatgaagaacttcagaagctatttaatcttcaaatacttccacatagagttgaaacctat
gataactcacatatgatgggacaagcaactgttggagctatggttgtttggaatgaagaa
ctaaatgcctttgataaaaaagatttcagacactataatcttgaatcaaaagatgaatat
tctcaaatgagagaaatattaatgagaagggttgatagttttgagaaaaatccagcacct
gatctttggatattagatggtgggtcagcactgctaaaattagcctatgatattattaat
tcaactggtgtgaatttagatattattgcaattgcaaaagaaaaagttgatgcaaaagct
catagagcaaaaggtgctgcaaaagatattgttcactataaagatgaaaaaggtgaatac
aggtctttaaaactagaaacaagtgatcaaagattacaatttgttcaaagacaaagagat
gaagctcatagatttgtaatcagctttcataaaaaacaaaaaagaaaagaagataagcaa
atttcattacttcaaataaaaggaataggagaagcaaaggtaaaaaaacttcttttatat
tttggagaatttgagaaaattagaaatgcttcaatagaagagttaaaagaagttctaaac
gaaaaagatgcgattgtaatttcaacttattttaaagaagaataa
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