Poseidonibacter parvus: LPB137_11085
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Entry
LPB137_11085 CDS
T04722
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
alp
Poseidonibacter parvus
Pathway
alp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB137_11085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_11085
Enzymes [BR:
alp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB137_11085
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB137_11085
RecFOR pathway proteins
LPB137_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
NB-ARC
AAA_14
Sigma54_activ_2
AAA_2
RNA_helicase
Sigma54_activat
AAA_18
nSTAND3
AAA_7
T2SSE
Motif
Other DBs
NCBI-ProteinID:
APW66352
UniProt:
A0A1P8KP20
LinkDB
All DBs
Position
2254222..2255250
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AA seq
342 aa
AA seq
DB search
MERIVEVESVSFEEDNNEVNLRPSSWDDYIGQEKIKRNLKVFIEASRKRNEALDHILFYG
PPGLGKTTISYLISNEMDTNIKITAGPMIEKSGDLAAILTNLEEGDILFIDEIHRLSPAV
EEILYPAMEDYRLDIIIGSGPAAQTVKIDLPRFTLIGATTRAGMLSNPLRERFGMHFRMQ
FYNHEELAKIIQIASTKLNKYCQNDAAEEISRRSRGTPRVALRLLRRVRDFAEVENEDEI
HLKRCKYALDELGVNESGFDEMDINLLELLVSNKGKPMGLSTMAAALSEDEGTIEDAIEP
YLLANGFIERTARGRIASIKTYEMFRLSYPNSGKLDDEGSLF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaattgtagaggttgaatcagtatcttttgaagaggataataatgaagttaat
ttaagaccttcttcttgggatgattatattggtcaagaaaaaataaaaagaaatttaaaa
gtatttattgaagcttcaagaaaaagaaatgaagccttagatcatatacttttttatgga
cctccgggacttgggaaaacaacaatctcgtatttaatttcaaatgaaatggatacaaat
ataaaaattacagcaggtccaatgattgaaaaatcaggtgatttagctgcgattttaaca
aaccttgaagaaggtgatattttatttattgatgaaatccatagactctcacctgctgtt
gaagagattttatatccagcaatggaagattatagacttgatattataattggctcagga
cctgctgcacaaactgttaaaattgatttaccaagatttacactaattggagcgacaaca
agggcaggaatgctttcaaatcctttaagagaaagatttggaatgcattttagaatgcaa
ttttataatcatgaagaattagcaaaaattattcaaatagcctctacaaaattaaataaa
tattgtcaaaatgatgcagcagaagaaatttcaagaagaagtagaggaactccaagagtt
gctttacgattattaagacgtgtacgtgattttgctgaagttgaaaatgaagacgagata
cacctaaaaagatgtaaatatgccttagatgaattaggtgttaatgaaagtggttttgat
gaaatggatattaatttacttgaattattagtatcaaataaaggtaaaccaatgggtctt
tctacaatggccgcagcacttagtgaagatgagggtacaattgaagatgcaattgaacca
tatttactagcaaacggctttatagaaagaacagcaagaggaagaattgcaagtataaaa
acatatgaaatgtttagactttcatatcctaatagtggcaaattagatgacgaaggtagt
ctgttttga
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