Arcticibacterium luteifluviistationis: DJ013_19810
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Entry
DJ013_19810 CDS
T05496
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
als
Arcticibacterium luteifluviistationis
Pathway
als03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
als00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DJ013_19810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
als03019
]
DJ013_19810
Messenger RNA biogenesis [BR:
als03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DJ013_19810
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_C_2
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWW00296
UniProt:
A0A2Z4GGX1
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All DBs
Position
complement(4854348..4855502)
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AA seq
384 aa
AA seq
DB search
MDTGKTFEDLGLSKPLLTAIAAQKYGKPYPIQQEAIPAILSGKDIQGIAKTGSGKTASFV
LPILEGFLNKKASRRRNLKVLILVPTRELAMQISEVISAFTENLEDEVKNLAVYGGIKVN
QQMVQLKDTEILVATPGRLLDLISSQSVSLGKVETLVLDEADKMLDLGFKEEFGQILKLL
PKKRQNLLFSATLDTKIIDLKKEILNDPVTIEITEEEDTLELIKQVAYMVSMDRKGPLLR
YIIKNQGITKVLVFTSSIRTADNVCNKLNRNGINASAIHSKKTQSARNKAMLDFKLGKIT
VLVATDIAARGIDIHFLPCVINYELPRSPKDYVHRIGRTGRAGAMGEAISLVTDEEEQHF
YIIQKKMGKRVEKVATEDFDLTGV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggtaaaacatttgaggatttaggattatcaaaaccactattgacggcaata
gccgcacagaaatatggtaagccatatccaattcagcaggaagccatacctgccatttta
tctgggaaagatattcagggaattgccaaaacaggttctggtaaaacagcgagttttgtg
ttgccaattttagaaggtttcttaaataagaaggcgtctagaaggaggaatttgaaggtg
ttgattttagtgccaacacgtgagctagccatgcaaatttcggaagtaatatcagctttt
accgaaaatctagaggatgaggtaaagaacttagcggtatatggtggaattaaagtaaac
caacaaatggtgcagctaaaagacaccgagatattggtggcaacgccaggaaggttgctt
gatttgatttctagtcaatctgtaagtttagggaaagtggaaactctagtactagatgag
gcagataagatgttggatttgggttttaaagaggagtttggccaaatactaaaactgctt
cctaaaaagcgtcaaaacttactgttctctgctacgcttgatactaaaataattgacctc
aaaaaagaaattctgaatgaccctgttactatagaaattacagaggaagaagacaccttg
gagctaattaaacaagtggcctatatggtcagcatggataggaaaggtccattattgcga
tatattataaagaatcagggaattacgaaggtcttggtttttacatcttctatcagaacg
gcggataacgtctgcaataaactgaataggaatggtataaatgcaagtgccattcatagc
aagaaaacacaaagtgcgagaaacaaggctatgctggattttaaactaggtaaaattacc
gttttagtggcaactgatatagccgccagaggtattgatattcattttttaccttgtgtt
attaattacgaactcccacgttcaccaaaagactatgtgcaccgaataggccgtacaggt
agggcaggagctatgggtgaagccatttctttagtgacagatgaagaggaacaacacttt
tatattatccaaaaaaagatgggtaagcgtgtggagaaagtagctacggaagactttgat
ttgactggggtttaa
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