Alteromonas naphthalenivorans: ambt_00330
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Entry
ambt_00330 CDS
T01513
Name
(GenBank) putative DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03030
DNA replication
alt03430
Mismatch repair
alt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ambt_00330
03430 Mismatch repair
ambt_00330
03440 Homologous recombination
ambt_00330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alt03032
]
ambt_00330
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_00330
Enzymes [BR:
alt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ambt_00330
DNA replication proteins [BR:
alt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ambt_00330
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ambt_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AEF01628
UniProt:
F5ZA14
LinkDB
All DBs
Position
83766..84449
Genome browser
AA seq
227 aa
AA seq
DB search
MLQWLSNWLSGRGPSSFDRFKNATLQDTTLMSIDLELTSLNANESEITSFGWVCGRNSSI
ALETSAYSVVKTKASLGQSPVIHGLIQDNIAKGEKIEDVLTKFTAQLPSKVLVIHNANLD
LAVLDAVFRRLNLPAQEVYYIDTLQLALYELKKEHEVVPSNSASLGACLLRAGLPAVPQH
NALEDAMAALLLCYAQLASLGLTQQSCLADLSHTKALGKKTLGVVKP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaatggctaagtaactggttatctgggcgcggtccatcatcattcgataggttc
aaaaacgcgaccttacaagacactacccttatgtcgattgatttagagctgacctcctta
aacgccaatgagtcagaaattacctcttttggctgggtatgtgggcgtaatagtagcatt
gctctagaaactagcgcttatagcgttgtgaaaaccaaggcgtctttagggcaaagcccc
gttatccatggacttattcaggataatattgcaaagggcgagaaaatagaagatgtgctg
actaaatttaccgcacagttaccctcgaaggttttagttatccataatgcgaatttagat
ttggcggtgctagatgcggtatttaggcgattaaatttaccggcacaagaggtttattac
atcgacactttacaacttgctttgtatgaattgaaaaaagagcacgaagtcgttccctca
aatagtgcatccctaggtgcatgcttactacgagctggtttaccggcggtgcctcaacat
aatgccttagaagatgccatggcagcgctactcctatgttatgcacagttagcgtcatta
gggctaacacaacaaagttgcttggcagacttatcacatactaaagcgcttggtaagaaa
acacttggggtggttaagccttaa
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