Allochromatium vinosum: Alvin_3099
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Entry
Alvin_3099 CDS
T01168
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
alv
Allochromatium vinosum
Pathway
alv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Alvin_3099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_3099
Enzymes [BR:
alv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Alvin_3099
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Alvin_3099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
Helicase_RecD
RecD_N
AAA_22
UvrD-helicase
AAA_16
PhoH
AAA_28
nSTAND3
NTPase_1
SLFN-g3_helicase
TPR_15
UvrD_C
AAA_5
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ADC63998
UniProt:
D3RS61
LinkDB
All DBs
Position
3493536..3495758
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AA seq
740 aa
AA seq
DB search
MDANALLSRLDAWTEAGALRRLDLALTRFIRDQTPETDPAVLLAIALTSERNGHGHVCLD
LAGALNRPYSVLTHRSDWLTPPPGPSTELAALLAPLTLDDWVARLARSGAIEDRLGLASD
PGLPARPAADTDARPNHEHPPLILDGAPERPLLYLRRYWTYEQRIRTGIAARLCRPVPLP
EDATRDLLDLLFAGDGSGTPGTDTLPWQRIACALAARRAFAVITGGPGTGKTTTVVRLLA
LLQGLALTAGGPPLRIRLAAPTGKAAARLNASIAAQVDQLPFDRLPGGRAMRAAIPTEAG
TLHRLLGPRPDSRHFRYGADRPLPADIVVVDEASMIDVELMSALLAALRPDARLIVLGDK
DQLASVEAGAVLGDLCRRARQAHYTPPTRDWLQRVTGARLPDDLIDPSGRPLDQAIAMLR
HSYRFRAEGGIGALAELVNAGVLDGRPVRDPLAALDRLFERQSDPSLQTDPGLGHLRRLR
LTGEPDTQLDHLVRAGYWHGLDSTGDSGSRTSHGAAGLDPVPGYLAVLHRERPGDDAGPD
AFDDWARAVLQAQAGFQLLTPLRQGPWGVEGLNRRIQHLLSQGAQAPLTGAGERQWFEGR
PVLVTRNDYALGLMNGDIGLTLRVPSRRDGSAGRLVLRVAFPAGDGSGAIRWILPSRLQA
VETVFAMTVHKSQGSEFNHTALVLPEASNPVLTRELIYTAITRSKSSFTLLYSRESVIRE
ALGRRVERVSGLAMALESGS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaacgcactgctgtcccgtctggacgcctggaccgaggccggcgccttgcgc
cgcctggatctggccctgacccgcttcatccgcgaccagacgcccgagaccgatccggcc
gtgctcctggccatcgccctgaccagcgaacgcaacggccatggtcacgtctgtctcgat
ctggccggcgctctgaaccggccgtacagcgtgctgacacaccggagcgactggctgacg
ccgccccccggaccgagcacggaactggccgccctcctcgcgcccctgaccctggacgac
tgggtcgcgcgtctggcgcgcagcggcgccatcgaggatcggctcggtctcgcgtccgat
cctggcctgcctgcacgacccgcagccgacacagacgcccgcccgaatcatgaacacccg
cccctgatcctcgacggcgcccccgagcgtccactgctctatctgcgccgttactggacc
tatgagcaacgcatccgcacgggcatcgcggcgcgtctgtgccgacccgtgccgctgccc
gaggacgccacgcgcgacctgctcgacctgctcttcgccggggacggctccggcacgccc
ggaaccgataccctcccctggcagcggatcgcctgcgccctggccgcgcgccgtgcattc
gcggtcatcaccggcggtcccggcaccggcaagaccaccaccgtggtgcgtctgctggcg
ctgctacagggactggcgctgacggcgggcggtccgcccctgcgcatccgtctggccgcc
ccgaccggcaaggcggcggcgcggctcaacgcctcgatcgccgctcaggtcgatcagctt
cccttcgaccggctgccgggcggccgcgcgatgcgggcggcgattccgaccgaggccggc
acgctccatcgcctgctcggcccccggcccgacagccgccacttccgctatggcgccgat
cggccactgccggccgacatcgtcgtggtcgacgaggcttcgatgatcgacgtggaactg
atgtcggcgctgctggcggcgctgcgtcccgacgcacgtctgatcgtcctcggcgacaag
gaccagctggcctcggtcgaggccggtgcggtgctgggcgatctgtgccggcgcgcgcgt
caggcccattacaccccgccgacgcgcgactggctgcaacgggtgacgggcgcgcgcttg
ccggacgacctgatcgatccgagcggacgccccctggatcaggccatcgccatgctgcgc
cacagctatcgtttccgcgccgagggcggcatcggcgccctggccgagctggtcaatgcc
ggcgttctggacggccggccggtgcgcgatccgctggccgcactcgaccggctcttcgag
cgccagtccgacccgagtctccagactgatcccggtctcgggcatctgcggcgcctgcgc
ctgaccggcgagccggacacccagctcgatcatctggtgcgcgccggttactggcacggt
ctggattcgaccggcgacagcgggagccggacgtctcacggtgctgccggtctcgatccg
gtgcccggctatctggcggtcctgcaccgggagcgccccggcgacgacgccggccccgac
gccttcgacgactgggcgcgcgccgtgctccaggctcaggccggcttccagttgctcacg
cccctgcgccaagggccttggggcgtcgagggactgaaccggcgcatccagcatctgctg
agccagggagcacaggcgccgctcacgggtgccggcgagcgtcaatggttcgagggacgc
ccggtgctcgtcacccgcaacgactatgcgctgggactgatgaacggagacatcggtctc
acgctccgggtgccgtcccggcgtgacgggagcgccggccggttggtcctgcgcgtggcc
tttccggccggcgacggctcgggcgccatccgctggatactgccgagccgcctgcaggcg
gtcgagaccgtcttcgccatgacggtgcacaagtcgcagggctcggagttcaaccacacc
gcgctggtgctgcccgaggcgtccaatcccgtgctgacgcgcgagctgatctataccgcc
atcacccgctccaagtcgtccttcacactgctctacagccgtgagtcggtgatccgcgag
gcgctcgggcggcgggtggagcgggtcagtgggctggcgatggcgctggagtccggctca
tga
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