Arabidopsis lyrata (lyrate rockcress): 110226735
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Entry
110226735 CDS
T01578
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03259
translation initiation factor 4E
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
110226735
03012 Translation factors [BR:
aly03012
]
110226735
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110226735
mRNA cycle factors
Common to processing body (P body) and stress granule
110226735
Translation factors [BR:
aly03012
]
Eukaryotic type
Initiation factors
eIF-4
110226735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IF4E
Motif
Other DBs
NCBI-GeneID:
110226735
NCBI-ProteinID:
XP_020874944
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MATDDVNESLPAAAELPATEAEKQPHKLERKWSFWFDNQSKKGVPWGASLRKAYTFDTVE
DFWGLRETIFQTSKLTAQAEIHLFKAGVEPKWEDPECANGGKWTWVVTGSNRKEDLDKGW
LETLMALIGEQFDEADEICGVVASVRPQAKQDKLSLWTRTKSNEAVLMGIGKKWKEILDV
TDKITFTNHDDSRRSRFSV
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgatgatgtgaacgagtccctcccggcggcggcggaattaccggcgacagag
gcggagaaacaaccacacaagctcgaaagaaagtggagtttctggttcgataaccaatca
aagaaaggcgtcccctggggagcttctcttcgtaaagcctatactttcgacaccgtcgaa
gatttttggggtttgcgagagactatattccagactagcaaattgacagcgcaggctgaa
attcacttgttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatgga
ggaaagtggacttgggttgttactggcagtaacaggaaggaagatttagacaagggctgg
cttgaaactttgatggctttaattggagagcaatttgatgaggcagatgagatttgtggt
gtggttgctagtgtccgcccacaggcgaagcaagacaagctctccttgtggactaggact
aaatcaaatgaagctgttctgatgggtattgggaagaagtggaaggagatacttgatgtc
accgacaagataactttcactaaccatgatgattcgagaagaagccggttctctgtctga
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