Arabidopsis lyrata (lyrate rockcress): 9304213
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Entry
9304213 CDS
T01578
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9304213
Membrane trafficking [BR:
aly04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
9304213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
9304213
NCBI-ProteinID:
XP_020873958
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MENNNLGLRFRKIPRQPVALPKLDPLLDENLEQWPHLNQLVQCYGTEWVKDVNKYGHYEN
IRPDTFQTQIFEGPDTDTETEIRLASARSATIEEDVASISGRPFSDSGSSKHFGQPPLPA
YEPAFDWENERAMIFGQRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFFGSIALYNQE
RKEKLSEDFYFHILPTEMQDAKNSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTTSV
YSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAVVPLFDNNVTTNTGESASPSSPLAPSM
TASSSHDGVYEPIAKITSDGKQGYSGGSSVVVEISNLNKVKESYSEELIQDPKRKVHKPV
KGVLRLEIEKHRNGHGDFEDLSENGSIINDSLDPTDRLSDLTLMKCPSSGSGGPRNGCSK
WNSEDAKDVSRNLTSSSGTPDLNCYHAFDFCSTTRNEPFLHLFHCLYVYPVAVTLSRKRN
PFIRVELRKDDTDVRKQPLEAIYPREPGVSLQKWVHTQVAVGARAASYHDEIKVSLPATW
TPSHHLLFTFFHVDLQTKLEAPRPVVVGYASLPLSTYIHSRSDISLPVMRELVPHYLQET
TKERLDYLEDGKNIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLRTSPPWGSELLQAINS
LKHVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFL
VTYVDYSFDDFGGNQPPVYPGLATVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKS
MALEQARLYDHNLPSGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSS
LAFFCYDLLYIIEPCQVYELVSLYMDKFSGVCQSVLHECKLTFLQIISDHDLFVEMPGRD
PSDRNYLSSILIQELFLSLDHDELPLRAKGARILVILLCKHEFDARYQKAEDKLYIAQLY
FPFVGQILDEMPVFYNLNATEKREVLIGVLQIVRNLDDTSLVKAWQQSIARTRLYFKLME
ECLILFEHKKAADSILGGNNSRGPVSEGAGSPKYSERLSPAINNYLSEASRQEVRLEGTP
DNGYLWQRVNSQLASPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENV
SATVSLQVLEITEIFSSMVASHNIATDYGKLDCITTILTSFFSRNQSLAFWKAFFPIFNR
IFDLHGATLMARENDRFLKQIAFHLLRLAVYRNDSVRKRAVIGLQILVKSSLYFMQTARL
RALLTITLSELMSDVQVTHMKTDNTLEESGEARRLQQSLSEMADEAKSVDLLRECGLPDD
TLLIIPEKFTENRWSWAEVKHLSDSLVLALDASLGHALLGSVMAMDRYAAAESFYKLGMA
FAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVARNDGVWSKDHVSALR
KICPMVSGEFTTEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVI
PVYKSRKAYGQLAKCHTLLTNIYESILDQESNPIPFIDATYYRVGFYGEKFGKLDRKEYV
YREPRDVRLGDIMEKLSHIYESRMDSNHILHIIPDSRQVKAEELQAGVCYLQITAVDAVM
EDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSF
PALVNRLLVTKSESLEFSPVENAIGMIETRTTALRNELEEPRSSDGDHLPRLQSLQRILQ
GSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEE
DQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacaatcttggtcttcgatttcgtaagatacctcgtcagcctgttgctctc
cctaagctcgatcctttgcttgatgagaatctggaacaatggccgcatttgaatcaattg
gttcaatgctatggcactgaatgggttaaagatgttaataaatatggtcactatgaaaat
attcgacctgatactttccagactcagatttttgaaggacctgatactgataccgagact
gaaatccgtcttgctagtgctaggagtgcaactattgaggaggatgtagctagtatatcc
gggaggccgttttctgattctggatcctctaagcactttgggcaacctcctttacctgct
tatgaaccagcttttgactgggaaaatgaaagagctatgatatttggccagagaactcct
gaatcccctgcagcaagctattccagtggattgaagatctccgtcagagttttgtctcta
gcttttcagtctggcttagttgaaccattttttggctcgattgcattgtacaatcaagag
aggaaggagaaactctctgaggatttttatttccatattttgccgacggaaatgcaggat
gctaaaaattcatctgaaaatcgtggagtattttatctagatgccccatcagcatcagtt
tgcctgcttattcaattagaaaaaacagcaacagaggagggaggcgttacaacatctgtc
tattcccgtaaagagcctgtgcacttaactgagagggaaaagcaaaagttgcaggtctgg
tctcgcattatgccttaccgagagtcttttgcttgggcagttgttccgctttttgataat
aatgtcaccacaaacactggtgaatctgcttcccctagcagtccccttgctcctagtatg
accgcgtcaagttcccatgatggtgtttatgaacccattgcaaagatcacatcagatgga
aagcaaggttattcaggtggaagttctgtcgtagttgaaatatctaatttaaacaaagtt
aaagagagctactctgaagagttaattcaggaccccaaacggaaggttcacaaacctgtt
aaaggggttctaagactggaaattgagaaacatcggaatggacatggagactttgaagat
ctatctgagaatggaagtatcataaatgactcccttgatccgactgaccgcctcagtgac
ctgacacttatgaagtgtcccagttctggttctggtggaccacgtaatggctgttcgaag
tggaattcagaggatgcaaaggatgtttcaagaaacctaacaagttcaagtgggactcct
gacttaaattgttatcatgcttttgatttctgctctacgacaagaaacgagccttttcta
catctcttccattgcctttatgtgtatcctgtagctgttactttaagtcggaagaggaat
ccctttatccgtgtagaattgagaaaggatgacactgatgtccgaaaacaaccactcgag
gcaatatatccaagagagcctggtgtttcactccagaagtgggttcatacacaggttgct
gttggtgctagggctgctagctaccatgatgaaattaaggtctctcttcctgccacatgg
acgccatcacatcatctgttattcactttttttcatgttgatctccagacaaagcttgaa
gctccaagaccagtagttgttggatatgcatcacttccattatctacctatatccactca
cggtctgatatttctctaccagtaatgagagaactggttccccactatcttcaggaaacc
accaaggagaggttggattatttggaagatggcaagaatatttttaagttgcgactgaga
ctttgttcatctctttatcccaccaatgaacgtgtcagggatttctgtctagagtatgat
agacataccctccggacaagccctccctggggttcagaactgttgcaggcaataaacagt
ttgaagcacgttgattctactgccttgcttcagtttctttacccaattcttaatatgctc
cttcatcttattggcaatggtggagaaactcttcaggttgcagcattcagagccatggtg
gatattttaactcgggtgcagcaggtgtcgtttgatgatgctgaccgaaatcgatttctg
gtcacctatgttgattattcttttgatgattttggaggcaatcaaccaccagtttatcct
ggattagcaactgtatggggaagtttagctagaagcaaggccaaaggttaccgggttgga
cctgtatatgacgatgtattatcgatggcgtggtttttcctcgagttgattgttaaatcg
atggcattggagcaggcacgtctttatgatcacaatctaccttcaggcgaggatgttcca
cccatgcagctcaaagaaagtgttttccgatgtatcatgcaattgtttgattgtctttta
actgaagttcatgaacgttgtaaaaagggcctaagcttggcgaaacgtctgaacagcagt
ttggccttcttctgttatgatcttttatatataattgagccctgccaggtttatgaactg
gtatcattatacatggacaagttttctggtgtttgtcaatctgttctacacgaatgcaag
ctcacgtttttgcaaattatctccgaccatgatctttttgtagaaatgcctggtagagac
ccatcagacaggaactatttatcatccatattaatacaggagttatttctttccctggat
catgatgagctgcctctgcgggcgaagggagcaagaattttagtgatcctcttatgcaag
catgaatttgatgcacggtaccagaaagctgaagataagctgtatattgcacaactatat
tttccatttgttgggcagattttagatgaaatgcccgtcttttataacctaaatgctact
gaaaagcgtgaggttttaattggcgtgctgcaaattgttcgtaatctggatgacacatca
cttgtcaaggcatggcagcagagcatcgctcgtactagattgtatttcaaactcatggaa
gaatgcctcatacttttcgagcacaagaaggctgctgacagcatcctcgggggcaacaat
tctcgtggtcctgttagtgaaggagctggatcaccaaagtactccgagcgactttctcct
gctatcaacaattatctgtcagaggcttctcgccaagaagtcaggctagagggaacacct
gacaatgggtacctgtggcagagagttaattctcagttggcctcccctagccaaccatat
tctctaagagaagctttagctcaagcacaatcttcgcggattggagcttcagctcaggca
ctaagagaatcgctgcaccctattttgaggcaaaaactggaactttgggaagagaatgta
agtgccactgttagcctccaggttttggagatcactgaaattttttcatcaatggtagcc
tctcacaatattgcaacggactatggaaaattggactgcattactacaatattgacgagt
ttcttctcccggaaccagtcattagccttctggaaagccttctttccaattttcaacaga
atctttgatcttcatggggctacactgatggccagggaaaacgatcgcttcttaaaacag
atagccttccatcttctccggcttgctgtttaccgcaatgacagtgtcaggaaaagggct
gtcattggtcttcaaatactagttaagagctcgctatactttatgcagactgctaggctg
agggctttgctgaccattacactgtcagaactcatgtcggatgtccaagtgactcatatg
aaaacagataatacattagaagagagtggagaagcacgtcggcttcaacagtcattaagc
gaaatggctgatgaagctaagagtgtcgatttgttgagggagtgtggtcttcctgatgat
acactgttgataattcccgagaaatttacagagaatcgctggtcatgggctgaagtcaaa
catctttctgatagccttgttcttgctcttgatgccagcctcgggcatgcccttttggga
tctgtgatggctatggatcgatatgctgcagcagagagcttctacaaacttggaatggca
tttgctcctgttccggatcttcacataatgtggttgctgcatctatgtgatgcccaccag
gaaatgcagtcttgggctgaagctgcacagtgtgctgtggcggttgcaggtgtgataatg
caggccttggtggctagaaatgatggtgtgtggagcaaggatcatgtgtctgccttgcgt
aagatttgcccgatggtaagtggcgagtttacaacagaggcatctgcagctgaagtcgag
ggttatggtgcttcaaagctaacagttgactccgccgtcaagtacctacagcttgctaat
aagcttttctctcaagctgagctctaccatttttgtgcaagcattttggaacttgttatt
ccagtttacaagagcaggaaggcttatgggcagttggctaagtgtcacactttacttact
aatatatatgagtccattcttgaccaagaatcaaacccaatcccatttattgatgctaca
tattaccgggtgggattttacggggaaaagtttgggaagttggacagaaaagaatatgta
taccgtgaaccacgagatgtgcggctaggggatataatggaaaagctgagccatatctat
gaatcaagaatggacagcaaccatattctgcacattataccagattcgagacaagtgaaa
gcagaagaattgcaggcaggagtgtgctacctgcaaattacagctgttgatgcagtgatg
gaagatgaggatcttgggagcagaagagagagaatattttctctttcgactggaagtgtt
cgagcacgagtgtttgatcgcttcttgtttgacacaccatttacaaaaaatggtaagacc
caaggtggattagaagatcaatggaagagaagaacagtgctgcagactgagggttcattc
cctgcgcttgtgaataggctgttggttaccaagtctgaatcccttgaattctcgccagtg
gagaatgcgattggaatgattgaaacgcggacaactgctctgagaaatgagctagaggag
cctcgtagctcggatggggatcacctaccacggcttcaaagtctgcagaggattctccaa
ggaagtgttgcagtgcaggtgaacagtggggtgttgagcgtgtgcacagcattcttatca
ggagagcctgcaactagattgcgttcgcaggaactgcagcaactgatcgcggcactgctt
gaattcatggcggtttgtaagcgagccattagggttcactttagattaatcggagaagaa
gatcaggaattccatactcagcttgtcaatggatttcagtctctcaccgctgaactctcc
cattacatccctgctatcttgtccgaactttag
DBGET
integrated database retrieval system
