Arabidopsis lyrata (lyrate rockcress): 9304269
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Entry
9304269 CDS
T01578
Name
(RefSeq) 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00730
Thiamine metabolism
aly00900
Terpenoid backbone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
9304269
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
9304269
Enzymes [BR:
aly01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
9304269
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Ortholog
Paralog
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-GeneID:
9304269
NCBI-ProteinID:
XP_002870230
UniProt:
D7MAG4
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MASSAFAFPSYIITKGGVSTDSCKSTSLSSSRSLVTDLSSPCLRPNNNSHTNRRAKVNAS
LAEKGEYYANRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL
GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE
HDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ
LAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV
VTEKGRGYPYAERADDKYHGVVKFDPATGKQFKSTNKTQSYTTYFAEALVAEAEVDKDVV
AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM
VATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEIGKGRILKEGERVALLGYGSAVQS
CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREALF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatctgcatttgcttttccttcttacataataaccaaaggaggagtttcaaca
gattcttgtaaatcaacttctttgtcttcttctcgatctttggttacagatctttcatct
ccatgtctcagacccaacaacaattcccatacaaacagaagagcaaaagtgaatgcttca
cttgcagagaagggtgaatattatgcaaacagaccaccaactccattacttgacactatt
aactacccaattcacatgaaaaatctttctgtcaaggagctgaaacaactttctgatgag
ctgagatcagatgtgatctttaatgtgtcgaaaaccggtggacatttggggtctagtctt
ggtgttgtggagcttactgtggctttgcattacatattcaatactccacaggataagatt
ctttgggatgttggtcatcagtcttatcctcacaagattcttactgggagaagaggaaag
atgcctacaatgaggcaaaccaatggtctatccggtttcacgaagcgaggagagagtgaa
catgattgctttggtacaggacacagttcaaccacaatatctgctggtttaggaatggcg
gtgggacgggatttgaaggggaagaacaacaatgtggttgctgtgattggtgatggtgcg
atgacggcagggcaggcttatgaagccatgaacaacgcaggctatcttgactctgatatg
attgtgattcttaatgacaacaagcaagtctcattacctactgctactttggatggacca
agtccacctgttggagcattgagcagtgctcttagtcggttacagtctaacccggctctc
agagagttgagagaagtcgcaaagggtatgacaaagcaaataggcgggccaatgcaccaa
ttggctgctaaggtagatgagtatgcccgaggaatgataagcgggactggatcgtcgctg
tttgaagaacttggtctttactatattggtccagttgatgggcacaacatagatgatttg
gtagccattcttaaagaagttaagagtactagaaccacaggcccggtacttattcatgtg
gtgacggagaaaggtcgcggttatccttacgctgagagagctgatgacaaataccatggt
gttgtgaaattcgatccagcgacgggtaaacagttcaaaagtactaataagactcaatct
tacacaacttactttgcggaggcattagtggcagaagcagaggtagacaaagatgtggtt
gcgattcatgcagccatgggaggtgggaccgggttaaatctatttcaacgtcgcttccca
acaagatgtttcgatgtcgggatagcggaacaacacgcagttacttttgctgcgggttta
gcctgtgaaggccttaagcccttctgtgcaatctattcgtccttcatgcagcgtgcttat
gaccaggttgtacatgatgttgatttgcaaaaattaccggtgagatttgcgatggataga
gcaggacttgttggagctgatggtccgacacattgtggagcttttgatgtgacatttatg
gcttgtcttcctaacatgattgtgatggctccatcagatgaagcagatctctttaacatg
gttgcaactgctgctgcgattgatgatcgtccttcttgtttccgttaccctagaggtaat
ggtattggagttgcattacctcccggaaacaaaggtgttccagttgagattgggaaaggt
aggattttaaaggaaggagagagggttgcgctgttgggttatggctcagcagttcagagc
tgtttaggagcggctgtaatgctcgaagaacgcggattaaacgtaactgtagcagatgca
cgattttgcaagccattggaccgtgctctcattcgcagcttagctaagtcgcatgaggtt
ctgatcacggttgaagaaggttcgattggagggtttggatcgcatgttgttcagtttctt
gctctcgatggtcttctcgatggcaaactcaagtggagaccaatggtactgcctgatcgg
tacattgatcacggtgcaccagctgatcaactagctgaagctggactcatgccatctcac
atcgcagcaaccgcacttaacttaatcggtgcaccaagggaagctctgttttga
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