Arabidopsis lyrata (lyrate rockcress): 9305710
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Entry
9305710 CDS
T01578
Name
(RefSeq) ABC transporter B family member 2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9305710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9305710
04147 Exosome [BR:
aly04147
]
9305710
04090 CD molecules [BR:
aly04090
]
9305710
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9305710
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9305710
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9305710
CD molecules [BR:
aly04090
]
Proteins
9305710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
Zeta_toxin
AAA_21
AAA_22
RsgA_GTPase
AAA_15
AAA_7
DUF87
DUF815
nSTAND1
APS_kinase
Motif
Other DBs
NCBI-GeneID:
9305710
NCBI-ProteinID:
XP_020873235
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MQPSGDPAPEKEKEMKQPKVSLLKLFSFADFYDCVLMTLGSVGACIHGASVPIFFIFFGK
LINIIGLAYLFPKQASHRVAKYSLDFVYLSVAILFSSWLEVACWMHTGERQAAKMRRAYL
RSMLSQDISLFDTEASTGEVISAITSDILVVQDALSEKVGNFLHYISRFIAGFAIGFTSV
WQISLVTLSIVPLIALAGGIYAFVAIGLIARVRKSYIKAGEIAEEVIGNVRTVQAFTGEE
RAVRLYREALENTYKYGRKAGLTKGLGLGSMHCVLFLSWALLVWFTSVVVHKDIANGGKS
FTTMLNVVIAGLSLGQAAPDISAFVRAKAAAYPIFKMIERNTVTKASAKSGRKLGKVDGH
IQFKDVTFSYPSRPDVVIFDKLNLAIPAGKIVALVGGSGSGKSTVISLIERFYEPISGAV
LLDGNNINEVDIKWLRGQIGLVNQEPALFATTIRENILYGKDDATAEEINRAAKLSEAIS
FINNLPEGFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQE
ALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGNHENLISNPDGAYSSLLRLQE
ASSLQRNPSLNRTLSRPHSIKYSRELSRTRSSFCSERESVTRPDGAEPSKKVKVTVGRLY
SMIRPDWMYGVCGTICAFIAGSQMPLFALGVAQALVSYYNSWDETQKEIKKIAILFCCAS
IITLIVYTIEHICFGTMGERLTLRVRENMFRAILKNEIGWFDEVDNTSSMLASRLESDAT
LLKTIVVDRSTILLQNLGLVVTSFIIAFILNWRLTLVVLATYPLVISGHISEKLFMQGYG
GDLNKAYLKANMLAGESVSNIRTVAAFCAEEKILELYSRELLEPSKSSFRRGQIAGLFYG
VSQFFIFSSYGLGLWYGSTLMDKGLAGFKSVMKTFMVLIVTALAMGETLALAPDLLKGNQ
MVASVFEILDRKTQIVGETSEELTNVEGTIELKGVHFSYPSRPDVVIFRDFDLIVRAGKS
MALVGQSGSGKSSVISLILRFYDPTGGKVMIEGKDIKKLDLKALRKHIGLVQQEPALFAT
TIYENILYGNEGASQSEVIESAMLANAHSFITSLPEGYSTKVGERGVQMSGGQRQRIAIA
RAILKNPAILLLDEATSALDVESERVVQQALDRLMTNRTTVVVAHRLSTIKNADTISVLH
GGKIVEQGSHRKLVLNKTGPYFKLISLQQQQQP
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtccggtgatccggcgccggagaaggagaaagagatgaagcagccaaaagtg
tcactgcttaagctcttctccttcgcagatttctatgattgtgttctcatgactcttgga
tccgtaggagcgtgcattcatggcgcctcggttccgatctttttcatcttcttcggcaaa
ctcatcaacattatcggtcttgcttatcttttcccaaaacaagcctctcacagagtcgcc
aagtactcgttggattttgtatacttgagtgtggctatactattctcgtcatggttagag
gttgcatgttggatgcatacgggagagaggcaagcggcgaagatgaggagagcttatctc
cggtcaatgttgagccaagacataagcttatttgacaccgaagcttctaccggagaagtc
atctccgccatcacctccgacatcctcgtcgtccaagatgctctctccgagaaggtagga
aatttcttgcactacataagccggttcatagctggttttgcaattggattcactagtgta
tggcaaataagtcttgtcactctctccatagtccccttaatcgctctagccggcggcatc
tacgcgttcgtcgccatcggacttatcgctcgtgtccggaaatcatacatcaaggccggt
gagattgcggaagaggtgatcgggaatgtgaggaccgttcaagcattcactggtgaagaa
agggcggtgagattataccgagaagctctggagaacacgtacaagtacgggagaaaagcc
ggtttaactaaaggactaggtcttggatcgatgcactgtgtcttgtttctgtcttgggcc
ttgctcgtatggttcacaagcgttgtagtccacaaggatatcgccaatggtggcaaatca
ttcactactatgctcaacgttgtcatcgccggcctgtcacttggacaagcggcgccggat
atttctgcgtttgtacgggcaaaagctgctgcttatccgattttcaagatgattgaacgg
aacacggtgacaaaagcaagcgcaaaatccggccgtaaactagggaaagtagacgggcac
attcaattcaaggacgtgactttcagctacccatctcgccccgatgtggtgatctttgac
aagttaaacctagctatccctgccgggaaaattgtggcacttgttggaggaagtggatca
gggaaaagcacggtcatatctttgattgagcggttctacgagcccatttctggagcagtg
ttgctagacgggaacaatatcaatgaggtggatattaagtggttaaggggacagattggt
ttggttaaccaagaaccagctctgtttgcaacaacgattcgtgagaacattctgtatggc
aaagacgacgcgacggctgaggagatcaaccgtgccgcaaagctctcggaagccatttcg
ttcatcaacaacctccctgaagggtttgagactcaggtcggcgagagagggattcaatta
tctggtggacagaaacaaaggattgctatatcaagagcaatcgtgaagaatccgtctata
ctattactcgacgaagcaacaagtgctttagacgcagagtcagagaaaagcgtgcaagaa
gcgctggatcgagtgatggttgggagaacaacggtggtggttgcacacagactctcaacc
gtaagaaatgctgacatcatagcagttgtgcacgaagggaaaatagttgagtttggaaac
cacgagaatctcatatctaatcccgacggagcctactcttctcttcttcgtcttcaagag
gcttcctcgttgcagcgtaacccttccttgaatcgcacgctaagcaggccacatagtata
aaatactcgcgggaactatcaagaacaaggtcgagcttctgttcagaaagggaatcagta
actcgaccggatggggccgagccatccaaaaaggtgaaagtaacggtgggacgtctttat
tctatgatccgtccggactggatgtatggcgtatgtggcacgatatgtgcctttatcgct
ggatctcagatgccccttttcgcgcttggagtcgcacaggccttagtttcctattacaat
agttgggatgagactcaaaaagagatcaagaagatcgctatcctcttttgctgtgcctcc
attatcaccctaattgtctacaccattgagcatatctgcttcggtactatgggcgagcgt
ctcactctccgtgtccgcgaaaatatgtttagagcaatcttgaagaatgaaatcgggtgg
tttgatgaggtggacaacacaagctcaatgttggcatcgcggcttgagagcgatgcgact
ttgcttaaaaccatagtggtcgataggtctacaattctactgcagaacttaggtctagtt
gtgacctcttttatcatcgcctttatactcaactggcgtctcactcttgttgtcttggcc
acataccctttggttataagcggacatatcagcgagaaacttttcatgcaaggctatgga
ggagacttgaacaaagcatacttaaaggccaacatgttggccggagagtctgttagcaac
atccgcacggtcgccgccttctgtgctgaggaaaagattctagaactttattcaagagag
cttttagaaccttccaaaagttctttcaggcgtggacaaattgcaggacttttctacggt
gtctctcagttcttcattttctcttcctatggcctcggcctctggtacggatcaactttg
atggacaaaggattagcgggcttcaaatcagtgatgaaaacattcatggttttgattgtg
acggcattagctatgggtgagacgttagctctagctccggatctgctgaaaggaaaccag
atggttgcgtccgtgtttgagatcttggacaggaaaactcagatcgttggagaaaccagc
gaggagctgactaatgtggaaggcacaattgagctcaaaggcgtccactttagctaccct
tcgagaccagatgttgtaattttccgagactttgatcttatagttcgtgccggaaagagc
atggcgctcgttggacagagtggatccggtaaaagttcggtcatttcactcattctccgg
ttctatgatccgactggcggaaaagttatgatagagggaaaagacataaagaaactagat
ttgaaagcactgaggaaacatattggtcttgttcaacaagaaccggcacttttcgccaca
acaatctacgagaacatattgtatggaaacgaaggagcatctcaatctgaagtcatagaa
tcagccatgcttgcaaacgctcacagcttcattacctctctcccggaaggttactctacc
aaagtcggtgaacgtggagttcagatgtcaggcggtcagcgacagaggatcgctatcgct
agagccatcctcaagaatccagcgattctattacttgacgaagccacaagcgctttggac
gttgaatctgagcgtgtggtacaacaagcattggatcggttaatgactaaccggacgact
gtggtggttgctcaccggctatcgacgatcaagaacgctgacacgataagcgtattacat
ggaggtaagatcgtagagcaaggcagccaccgtaagctcgttctaaacaagactggtcca
tattttaaactcatcagtcttcagcagcagcaacaaccttaa
DBGET
integrated database retrieval system
