Arabidopsis lyrata (lyrate rockcress): 9307003
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Entry
9307003 CDS
T01578
Name
(RefSeq) mRNA-capping enzyme isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9307003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9307003
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
9307003
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
9307003
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
9307003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Y_phosphatase2
DNA_ligase_A_M
Y_phosphatase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
9307003
NCBI-ProteinID:
XP_002873017
UniProt:
D7M740
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MDLNASPQPEEDEESFKRRHEDRVESAVEIARREREERKKRMRYDRPTRSSQPVFRDQSY
QKRDTRVYDQSKLPQGWLDCPGFGLEIGCIIPSKVPLSESYNEHVPPGKRYSFKQVVRNQ
RINGRKLGLVIDLTNTTRYYPTLDLKKDGIKHVKIACRGRDAVPDNVSVNTFVNEVLQFV
LNQKHAKKYVLVHCTHGHNRTGFMIVHYLMRSMPTMNVTQALKMFSDARPPGIYKADYID
ALYTFYHEIKPESVTCPPTPEWKRSTELDLNGEAVQDDDDDDDSPPDPVQEINQETVKMS
NDDILGDEIPHYQEEAYRQFCYKMLYPENKKMNIGGGGCKPFPGSHPVSLDRESLQLLRQ
RYYYATWKADGTRYMMLLTIDGCYLIDRSFKFRRVQMRFPCKHSREGISDKVHHYTLLDG
EMVIDTPTGEQGEARRRYLVYDMVAINGESVVERTFCERWNMFVREVIGPRAAEKLRSHC
YRYDLEPFAVRMKGFWLLSTVEKLLKNTIPSLSHEADGLIFQGWDDPYVPRTHKGLLKWK
YAEMNSVDFLFETGEEEGRGFLFLHERGKKKLMEGYSVEFRDDSDPSSYNGKIVECAWDK
DKKVWFSMRIRVDKTTPNDINTARKVIKSINDNITEEVLLEEIKEIIRLPMYADRIRNDS
QAARRK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggacctaaatgcttcaccccaacccgaagaagacgaggaatcctttaagagacgtcat
gaagatcgagttgaatctgctgttgagatcgctagacgggagcgtgaagaacgaaagaaa
cgaatgagatatgacaggccaaccagaagctctcagccggtttttcgtgaccagtcttat
cagaagagagatactagagtttatgatcaaagcaagcttcctcagggttggctagattgt
cctggttttggtctggagataggttgtattattccttctaaggttcctcttagtgaatct
tacaacgaacatgttcctcctggtaaaagatactcttttaaacaggtggtccgtaaccag
agaattaatggaagaaaacttggtcttgtgattgatctaactaatacaactcgttactac
cctacacttgacttaaagaaggatggcatcaagcatgttaagattgcatgcaggggtcgt
gatgccgtgcctgataatgtgtctgtaaacacctttgtcaacgaggttctgcagttcgtc
cttaatcaaaaacacgcaaagaagtatgtcctcgtccactgtacacatgggcataatcgg
acagggttcatgatagttcattatcttatgcgctctatgccaaccatgaacgttacacag
gcattgaaaatgttttctgatgcccgcccacctgggatttataaagcggattatattgat
gctttatacactttttatcacgaaataaagcctgagagtgttacttgcccaccaactcct
gaatggaagaggtctaccgagcttgatcttaatggtgaagctgttcaagatgatgatgat
gatgatgattctccgcctgaccctgttcaagaaattaatcaggagactgtgaagatgtca
aatgatgacattttgggtgatgaaataccccattatcaggaggaagcttaccggcaattc
tgttataagatgctttatccagaaaacaagaagatgaatattgggggaggaggatgtaag
ccattcccaggttcgcaccctgtatcattagacagggagagtttgcaacttttgagacag
cggtactattatgcgacatggaaggcagatggaacacgttatatgatgctcttaactata
gatgggtgctatttgatagataggagctttaagtttcggagggtacagatgcgttttccc
tgtaagcactcacgtgagggaatttctgataaagtacatcactacactttgcttgatgga
gagatggtcatagataccccaacaggtgaacaaggggaggcgaggaggaggtacctcgta
tatgatatggtagcaatcaatggcgaatcagtcgtagagcggactttctgtgaaagatgg
aacatgtttgtgcgtgaggtgatcggacctcgagcagctgagaagctcagaagtcattgc
tatagatatgaccttgagccttttgcggtacggatgaagggtttttggttactttcgact
gttgagaagcttttgaagaataccattccatcgctttcgcatgaagcagatggcttaata
tttcagggttgggatgatccttatgttccacgaacccataaaggtctattgaagtggaag
tatgcagaaatgaactcggtagactttctgtttgagacgggtgaggaggagggacggggt
ttcctcttcttgcatgaaagagggaagaaaaagcttatggaaggatattcagttgagttt
agagatgattcggacccgtcaagttacaatgggaagattgtagagtgtgcatgggataag
gataagaaagtttggtttagcatgcggatcagagttgacaaaactacaccaaatgatatc
aacaccgctcgtaaggtgataaagagcataaatgataacatcactgaggaagtgttgctt
gaggaaataaaagagatcatacgtcttccgatgtacgctgaccgcattcgaaatgatagt
caagctgcacgtcgcaagtag
DBGET
integrated database retrieval system
