KEGG   Arabidopsis lyrata (lyrate rockcress): 9307660
Entry
9307660           CDS       T01578                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250  Viral life cycle - HIV-1
aly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9307660
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9307660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9307660
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9307660
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    9307660
Exosome [BR:aly04147]
 Exosomal proteins
  Proteins found in most exosomes
   9307660
SSDB
Motif
Pfam: UEV Vps23_core UQ_con
Other DBs
NCBI-GeneID: 9307660
NCBI-ProteinID: XP_020878233
LinkDB
Position
Unknown
AA seq 368 aa
MAPPPAKMQEIHQFLSSALSQRGPSALPYDETTKSLIRQHLLNLISSYTSLDPKTATFTH
NDGRSVILLQADGTIPMPFQGVNYNIPVVIWLLESYPHYPPCVYVNPTRDMIIKRPHTNV
SPSGLVSLPYLQNWVYPSSNLVDLASHLSAAFSRDPPLYSQRRPPPQPSPSIGSGYSRPL
NPYQTDGAAEVYKKNAINKIVEMVHGDLVLMRSAREVETEGLLSLQSGLKRREEEINNGL
KEMVNEKETLEQQLQVIAMNTDVLGSWIRENQGKAKNLLVDLDVGDAFECSETLSKQMLE
CTALDLAIEDVVYSMDKSFRDGSLPFDQYLRNVRLLSREQFFHRATAEKVREIQMDAQVA
SIAARLHS
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggctcctcctccggcgaagatgcaagagatccaccaattcctttcctccgcactctcc
caacgtggcccttccgctctcccctacgacgagaccaccaagtcgctaatccgtcaacac
ctccttaacctaatctcttcctacacttccctagacccgaaaacggcgacgtttacacac
aacgatggccgatccgtgatccttctccaagccgacggcacaatcccgatgcctttccaa
ggcgtcaactacaacatccccgtcgtgatctggctcctcgaatcttaccctcactatcct
ccttgcgtttacgtgaaccctacgcgcgacatgatcatcaagcgacctcacactaatgtc
tctccttctggactcgtctctcttccttaccttcaaaattgggtttaccctagctccaat
ctcgtagatctcgcctctcatctcagcgccgccttctcccgtgatccgccgctttactct
cagcgccgtcctcctccgcaaccgtctccttccatcggatctggatactcgagacctctt
aatccttaccagacggatggtgcggcggaggtttataagaagaacgcgatcaacaagatt
gttgagatggttcatggtgatcttgtattgatgaggagtgctagagaagtggagacggaa
ggattactgagtttacaatctggacttaagagaagagaagaggagatcaacaatggtttg
aaggagatggtgaatgagaaagagaccttagagcagcaattacaggttattgccatgaat
actgatgttcttggttcttggattagggagaatcaagggaaggctaagaatttgctagta
gatttggatgttggtgatgcatttgaatgcagtgagacattgtccaaacagatgttagag
tgtactgcactggatttagccattgaagatgttgtttattccatggataaatcgtttcga
gatggttcgttgccgtttgatcagtatttgaggaatgtgaggttgttgtcgagggagcag
ttcttccaccgagccacggctgagaaagttagggagatacagatggatgctcaggttgct
tccattgcagctaggttgcactcgtga

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