Arabidopsis lyrata (lyrate rockcress): 9310876
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Entry
9310876 CDS
T01578
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9310876
Enzymes [BR:
aly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
9310876
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
9310876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_4
Kelch_3
Kelch_1
Kelch_5
Kelch_6
Kelch_2
MTS
DNA_methylase
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
9310876
NCBI-ProteinID:
XP_020878301
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MDFEKRKAATLASIRSSVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQP
KPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPSKSNQIDPIDQPSELVFRFEPLII
AVECKDLGSAQFLVALAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPLGDTEKLMVSP
EYVKFLVDIGNEKMDANRKRTDGFSVALTSNGFKNPDANDVDEDDNYENLAGDHDSSINN
GNLHPVSVCKSLAGLQQDLIPLSKLSIVGEPVEKLHLWGHSACTIDKPDRKEVIVFGGFG
GFGRHARRNESLLLDPSCGNLKLIAVNESPSARLGHTASMVGDFMFVIGGRADPLNILND
VWRLDISKGEWSSQRCIGSEFPPRHRHAAASVGTKVYIFGGLYNDKIVSSLHILDTKDLQ
WKEVEQQGQWPCARHSHAMVAYGSQLFMFGGYNGENVLNDLYSFDVQSCSWKLEVISGKW
PPARFSHSMFVYKHNTGIIGGCPVSQNCQELTLLDLKHRLWRSVRLEFMNKELFVRSTAS
VLGDDLIVIGGGAACYAFGTKFSEPVKTNLVQSVTMSENNVPLQPEDVSIEWNKNDADLK
TEMSLSQPWVIQLERKYAKFGKDLLKSFGWLDLERKVYSNEKGLCICFPVTEKFSELFHE
KQLLGKDLEGSEDDSLEKGLSLKDISSSAALNLLKEHGAKKLINVAFEAKKVAKSPLQRM
REYITSILKQKGLPEELLDELPQKWERLGDIVVLPATSFKDPTWNSISDEVWCAVSKSLS
ANRLARQGRVEPNGTRDSTLEILVGDNGWVDHCENGILYSFDATKCMFSLGNLSEKLRMG
NMACENEVVVDLFAGIGYFVLPFLVRAKARLVYACEWNPHAIEALRRNVEANSVSDRCII
LEGDNRITAPKGVADRVNLGLIPSSEGSWVTAIQALRPEGGILHVHGNVKDSDESSWGEH
VTKTLSDIARAEGRSWEVTVEHIEKVKWYAPRIRHLVADVRCRC
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgagaagagaaaagctgcaacactagcttcaattcgttcgtcagtgactgac
aaatctcccaaaggttttctcgacgaacccatcatccctcttctcgaaaccatcaatcac
cacccatcttacttcactaccagttcctgctcaggtcgaatctcaatcctttctcaaccc
aaaccaaaatcgaatgattcaacgaagaagaaagctcgtggcggttcatggctctacatc
acacacgacccagctgattcggatttggtaatttctctgctttttccttcgaagtcaaat
cagattgacccaattgaccagcctagcgaattagtcttccgattcgagccgttgatcatt
gctgtcgaatgtaaggatttgggttcggctcagtttcttgtggcgttagctatatcagct
gggtttagagaatcgggtatcacatcttgtggggatggcaaaagggtaattattgctata
cgatgttcgattcgaatggaggtgcctcttggtgatacagagaagctgatggtttcgccg
gagtatgtgaagttccttgttgatattggaaatgagaagatggatgctaataggaagcga
accgatgggtttagtgtagctttgactagtaatggtttcaagaatccagatgcaaatgat
gttgatgaagatgataattacgagaatctagctggagatcatgattcaagtatcaacaac
ggaaacttgcatcctgtttccgtatgtaaatcattggcagggcttcagcaagatctcata
ccgctctcgaaattatccatagtcggggaacctgttgagaagctccacctttggggacac
tcagcttgtacgatagataaacccgaccgaaaagaggttatcgtgtttggtgggtttgga
ggttttggtagacatgctcgaagaaatgagtctttgctgctcgatccttcatgtggcaac
ttaaagttgattgctgtcaatgaatctccatcagcacgacttggccacacagcttcaatg
gttggcgatttcatgtttgtgattggaggaagggctgatcccttgaacattttgaatgat
gtgtggaggctcgatatatccaagggtgaatggagctcacagaggtgtattggaagtgaa
tttcctccaaggcatcggcatgcagcagccagtgttggcacgaaagtatacatatttggt
gggctttacaatgataagatagtttcctctttgcacattttggatacaaaggacctgcag
tggaaagaagttgaacaacaaggtcaatggccctgtgcgcgccactctcatgctatggtt
gcatatgggtcacagttattcatgtttggaggatacaatggggaaaatgtactcaatgat
ctatacagctttgatgtgcaaagctgttcttggaaacttgaagtgatttctggaaaatgg
cctcctgcaaggttttcacactcaatgtttgtttataagcataatactggcataattgga
ggttgtcctgtttcacaaaattgtcaagagttgactttgctagatctgaagcaccgattg
tggaggagtgtgagattggaatttatgaacaaagagttgtttgttagaagtacagccagc
gttcttggtgatgatcttatcgtcattgggggtggggctgcttgctatgcttttgggaca
aagtttagtgaaccagtgaaaaccaacttggttcaatctgtgactatgagtgaaaataat
gttcctctccaacctgaagatgtttctatagaatggaataaaaacgatgcagatttgaag
actgaaatgtctctgtctcaaccatgggtgatacagttagaaagaaaatatgcaaagttt
ggcaaggatctacttaaaagttttggatggttagaccttgagaggaaggtttactcaaac
gaaaaaggtctttgtatatgctttcctgtgactgaaaagttttctgaacttttccatgag
aagcagcttttgggcaaggacttagaagggtcagaggatgatagcctagaaaagggtcta
tccttaaaagacatatccagctcagcggctttgaatcttctgaaggaacatggtgctaaa
aaactcattaatgtcgcttttgaagccaaaaaagttgcgaaatcccccttacagagaatg
agagaatatatcacatctatacttaaacagaaaggcctaccggaagagcttttggacgag
ctcccacagaaatgggaacggcttggggatattgttgtgcttcctgcaacatcctttaaa
gatccaacttggaactctatcagtgatgaagtttggtgtgcggtttctaaatcacttagt
gccaaccgccttgcacgccaaggacgagttgaacctaatggtacaagggatagtacattg
gagattcttgtgggagataatggatgggttgatcactgtgaaaatgggatcttgtactct
ttcgatgctacaaagtgtatgttctcattgggtaatctctcagaaaagcttcgtatgggt
aacatggcctgtgaaaatgaagttgtggtggatctgttcgctggaattggatattttgtt
ctcccatttcttgtgagggcaaaagcaaggctagtatatgcttgtgagtggaatccccat
gctattgaagctcttcgacgtaatgttgaagcaaattctgtttctgaccggtgtatcatt
cttgaaggggataaccggatcaccgcaccgaaaggagtggctgacagagtcaatcttggt
cttatcccgagtagcgaaggaagctgggtcacagctattcaggcattaaggcctgaggga
ggaatactccatgtgcatggaaacgtcaaggactcagatgagagcagttggggcgagcat
gtcaccaaaacattaagtgatatcgccagagccgaaggtcgtagctgggaagtgacagtg
gaacatatagagaaggtgaaatggtacgctcctcggattcgccatcttgtcgccgatgtg
agatgcagatgttga
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integrated database retrieval system
