KEGG   Arabidopsis lyrata (lyrate rockcress): 9316920
Entry
9316920           CDS       T01578                                 
Name
(RefSeq) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    9316920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9316920
   03009 Ribosome biogenesis [BR:aly03009]
    9316920
Messenger RNA biogenesis [BR:aly03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     9316920
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    9316920
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-GeneID: 9316920
NCBI-ProteinID: XP_002880853
UniProt: D7LFF2
LinkDB
Position
Unknown
AA seq 223 aa
MNKLSNAFSLLAFADEDAPMASSSSSTGKQEERVNGSLEDGDYKQPLVWIDLEMTGLNVE
VDRILEIACIITDGNLTKSVEGPDLVVHQTKDCLDKMGEWCQTHHGDSGLTKKVRLSTIS
EREAEQKVIEFVRKHVGSENPLLAGNSVYVDFLFLKKYMPELAALFPHILVDVSSVKALC
SRWFPIEKRRAPAKKNNHRAMDDIRESIKELKYYKKTIFKARK
NT seq 672 nt   +upstreamnt  +downstreamnt
atgaacaaactctccaacgctttctctctgctagctttcgccgatgaagatgctccaatg
gcttcttcttcttcttccactgggaaacaagaagaaagagtaaatgggtcacttgaggat
ggagattacaagcaaccacttgtttggattgacttggaaatgactggtctaaatgttgaa
gttgacaggatattggagattgcttgtataattactgatggaaatttaaccaaatcagtg
gagggtccagatttggttgtacatcaaacgaaagactgtttggataaaatgggtgaatgg
tgtcaaactcatcatggagatagtgggttgacaaagaaagtgcgccttagtacgataagt
gaaagggaagctgagcaaaaggtcattgaattcgtaaggaagcatgttggttctgaaaat
ccacttctagctggaaactcagtctatgttgatttccttttcttaaagaagtacatgcca
gaattagctgcccttttccctcatatacttgtcgacgtcagtagcgtcaaggctctatgc
tcccgatggttccccatagagaaaaggagagctcctgcaaagaaaaacaaccacagagcc
atggatgatataagagaaagcataaaggaacttaagtactacaagaaaacaatattcaaa
gcaaggaaatga

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