Arabidopsis lyrata (lyrate rockcress): 9323563
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Entry
9323563 CDS
T01578
Name
(RefSeq) cyclin-dependent kinase D-1 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022
Basal transcription factors
aly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9323563
09124 Replication and repair
03420 Nucleotide excision repair
9323563
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aly01001
]
9323563
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9323563
03019 Messenger RNA biogenesis [BR:
aly03019
]
9323563
03400 DNA repair and recombination proteins [BR:
aly03400
]
9323563
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
9323563
2.7.11.23 [RNA-polymerase]-subunit kinase
9323563
Protein kinases [BR:
aly01001
]
Serine/threonine kinases: CMGC group
CDK family
9323563
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
9323563
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
9323563
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
9323563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
9323563
NCBI-ProteinID:
XP_020890527
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MSIPSKLRALDSVADSEFLLSCVPFEVSLPRNNLVESDSFKNGETVAIKKIRLGKEKEGV
NVTALREIKLLKELKHPHIIELIDAFPHKENLHIVFEFMETDLEAVIRDPNLFLSPADVK
SYLQMILKGLEYCHDKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFA
RWYRAPELLFGAKQYGGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKAD
QWPDMICLPDYVEYQFVPAPALRSLLPTVSEDALDLLSKMFTYDPKSRITIQQALQHRYF
TSAPSPTDPLKLPRPVRKQDAKSSDSKHEAIKVLSPAHKLRRVMPDRGKSANGFKEQSVD
VMRQASHDGQAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEFL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcccatcaaaacttagggctttagattctgtcgctgattctgaatttctcctc
tcgtgtgtgccttttgaggtgtctcttcctaggaacaatttggttgaatctgatagcttt
aagaatggagaaactgtagcgattaagaaaataagacttggtaaagaaaaagaaggtgtg
aatgtaacagctcttagagaaatcaaattacttaaagagcttaagcatccacatataatt
gagttgattgatgcattccctcacaaggagaacttgcacattgtgtttgagttcatggag
actgatctcgaagcagttatccgcgatcctaatctgtttctttcgcccgctgatgtcaaa
tcttacctccaaatgatattgaaaggtcttgaatattgccatgacaaatgggttttgcac
agagatatgaagccaaacaatttgttgataggacccaatggacaactgaaacttgccgat
tttgggttagctcgtatatttggtagccctggtcgtaagtttacccaccaggtctttgct
agatggtatagagcacctgaacttttgtttggtgcaaaacaatatggtggtgcagttgat
gtttgggctgctggctgcatttttgctgaacttctattacgcagaccatttcttcaggga
aacagtgatattgatcaattaagcaaaatctttgctgcctttgggaccccaaaagcagat
cagtggcccgatatgatctgccttcctgattatgtagagtatcaatttgtccctgcgcct
gctttacgttctttactcccaacggttagtgaggatgcattagatttgttgtcaaagatg
tttacctatgatcccaagtctagaataacgattcagcaggctctacaacacaggtacttc
acatctgcaccttcgcctactgaccctttaaagctcccaagaccagttcgcaagcaggac
gctaagtcatctgacagtaaacacgaagctattaaagtgttgtcaccagcacataagctt
agaagagtgatgcctgaccgaggaaagtctgctaacggtttcaaggagcagagtgttgat
gtcatgagacaagctagccatgatggacaagcaccgatgtctttagatttcaccatccta
gccgagcggcctcctaaccgaccaaccatcacgagtgcggatagatctcatttgaagagg
aaactcgatctcgagttcctatag
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integrated database retrieval system
