Arabidopsis lyrata (lyrate rockcress): 9324500
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Entry
9324500 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
9324500
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9324500
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9324500
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9324500
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
9324500
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
9324500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Ribosomal_L12
ZapD
DUF5667
Motif
Other DBs
NCBI-GeneID:
9324500
NCBI-ProteinID:
XP_002888437
UniProt:
D7KSF3
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWQVGEKDD
RPTIQDQVSNLFFANQVINNACATQAILAILLNSPEVDIGPELSALKEFTKNFPSDLKGL
AINNSEAIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGPCPGDQTGIEWLKMVQPVIQERIERYSQSEIRFNLLAVIKNRKDIYTAELKELQRQRE
QLLQQANTCVDKSEAEAVNALIEEVGSGIEAASDKIVMEEEKFMKWRTENIRRKHNYIPF
LFNFLKLLAEKKQLKPLIEKAKKQKTESST
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcacgattgagtcggatcctggtgtatttacagagcttattcaacaaatg
caagtcaaaggagtgcaggttgaagaattgtattccctggatcttgattctctcaataac
ctcagacccgtatatggtctgatctttcttttcaaatggcaagttggggaaaaagatgat
cgtccaacgatccaagatcaagtttcaaacttgtttttcgcaaatcaggtcattaacaat
gcttgtgcaacccaagcgatcctggctatcctcttgaattctccagaggttgacatcggg
cctgaactatcggcgctgaaagaattcaccaagaactttccatctgaccttaagggtttg
gctatcaataacagtgaggcaattcgggctgctcacaacagtttcgcaaggcctgagcca
tttgtcccagaggaacagaaagctgctacaaaagatgatgacgtataccatttcataagc
tacatacctgtggatggagtcttgtacgagcttgatgggctcaaggaaggacctatcagt
cttggtccatgccccggagaccaaaccggcatcgagtggctgaaaatggttcaaccagtg
atccaagaaaggattgagaggtactcacagagcgagattaggttcaatcttttggctgtc
attaaaaacaggaaggatatctacacagcagaactgaaggagcttcaaaggcagagggaa
cagctgttgcagcaggctaatacttgtgtggacaaaagcgaagcagaagcagttaatgcg
ttgattgaggaggtaggcagtgggatcgaggctgcgagtgataagattgtaatggaggaa
gagaagttcatgaaatggagaacagagaacattaggaggaagcataactacattccgttt
ttgttcaacttcctcaaacttcttgctgagaagaaacagttgaaacctctgattgagaag
gccaagaaacagaaaacagaaagctccacttga
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