KEGG   Arabidopsis lyrata (lyrate rockcress): 9324793
Entry
9324793           CDS       T01578                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-3B
  KO
K03869  cullin 3
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9324793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9324793
   03400 DNA repair and recombination proteins [BR:aly03400]
    9324793
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     9324793
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     9324793
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Glyco_hydro_68
Other DBs
NCBI-GeneID: 9324793
NCBI-ProteinID: XP_020891349
LinkDB
Position
Unknown
AA seq 714 aa
MSNQKKRNFQIDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGDKLY
TGLVTTMTFHLKEICKSIEEAHGGAFLELLDRKWNHHNKALQMIMDRTYVSSTKKRHVHE
LGLHLWRDNVVYSSKIQTRLLNTLLDLVYKERTGEVIDRLLMRNVIKMFMDLGESVYQDD
FEKPFLEASAEFYKVESQGFIESCDCGDYLKKAEKPFVEEVERVAHYLDAKSEAKITSVV
EREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGLVTIRDVMTLHLREM
GKQLVTDPEKSKVPVEFVQRLLDERDKYDKIINMAFNNVKTFQNALNSSFEYFLNLNTRS
PEFISLFVDDKLRKGLKGVGEEDVDLILDKVVMLFRYLQEKDVFEKYYKQHLAKRLLSGK
TVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGFYNSHPELSEGPTLVVQV
LTTGSWPTXPTIQCNLPAEVSVLCEKFRSYYLGTHTGMKLSWQTNMETADIKAVFGKGQK
LELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTSDLKRCLHSMACVKGKNMLRKEPMS
KXEDSFVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKAR
RVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLGRDNTDRKLYRYLA
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgagtaatcagaagaagagaaatttccagattgatccaaaatacgccgataaaacttgg
aagattctggaacatgcgattcatgagatttacaatcacaacgctagtggtctcagtttc
gaagagctttacagaaacgcatacaacatggttctacataagtatggtgataagctttat
actggacttgttaccactatgacatttcatctcaaagagatatgtaagtctattgaagaa
gctcatggaggtgctttcttagaattgcttgataggaaatggaatcatcacaacaaagcg
ttgcaaatgattatggatcggacttacgtttctagtactaagaaaaggcatgttcatgag
cttggacttcatctttggagggataatgttgtgtattcgagtaagattcagactaggctt
ttgaatacgcttcttgatttagtttataaggaacggaccggtgaagttatagataggttg
ttgatgaggaatgtgattaagatgtttatggatttgggtgaatctgtgtatcaggatgat
ttcgagaagccgtttttggaagcttctgctgagttttacaaggttgagtcacaggggttt
attgagtcttgtgattgtggtgattatttgaagaaagcggagaaaccttttgtggaagaa
gtcgaaagggttgctcactatttggatgccaagagcgaagcgaagattactagtgttgtt
gaaagagaaatgattgctaaccatgtgcagagactagttcatatggagaattcaggtttg
gttaatatgcttttgaatgataagtatgaggatatgggtagaatgtacagtttgttccgc
agggttgccaatggtcttgttactattagagatgttatgactttgcatcttagggagatg
ggaaaacagctggttaccgatccagagaaatcaaaggttcccgttgaatttgtgcagcgt
ctattggatgagcgggataagtatgacaaaattatcaacatggcattcaacaacgttaag
acgttccagaatgcgctgaattcttcgtttgagtatttcctcaacttgaacacccgttct
cctgagtttatctccttgtttgttgatgataaactacgaaaaggactaaaaggtgtgggg
gaggaggatgtggatcttattcttgataaggtggtgatgttgtttcgctatttacaggag
aaagacgtttttgagaaatactacaaacaacatctggcaaaaaggcttttgtctggaaaa
actgtgtcggatgatgctgagaggaatctgatagttaaactgaagacagaatgtgggtat
cagttcacttcgaaactggaaggtatgttcactgacatgaagacctcacacgatacactg
ctaggattttataatagccatcccgagctttcagaaggaccgacacttgttgttcaggtt
ctcacaaccggttcttggcccacatagccaaccatacagtgtaacctacctgcagaagtt
tctgttctgtgtgagaagttcaggtcatattacctcgggactcacaccggcatgaaattg
tcttggcaaaccaatatggaaacagcagatatcaaagcagtgtttggaaagggtcagaag
cttgaactaaatgtttcgacttttcaaatgtgtgtccttatgttgttcaacaactctgat
cgactgagctacaaagagatcgaacaggcaactgaaatccccacctcagacctaaagcgt
tgcttgcattcaatggcgtgtgtaaaaggtaaaaacatgctaagaaaagaaccaatgagc
aagngagaggactcattcgttgtgaacgacaggttcgcaagcaagttctacaaagtgaag
ataggaactgtggtggcacaaaaggagacagaaccggagaagcaagagacaagacagaga
gtagaagaagacagaaaacctcagatcgaagcagctattgtgaggatcatgaaggcaaga
cgagtgttggatcacaacaacattatcgcagaggtcaccaaacaattgcagtcgcggttc
ttggcaaacccaacagagataaagaagagaattgaatcgctcattgagcgtgatttcttg
gggagggataatacagaccgaaaactttaccgctatttagcgtaa

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