Arabidopsis lyrata (lyrate rockcress): 9328175
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Entry
9328175 CDS
T01578
Name
(RefSeq) ABC transporter B family member 11
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9328175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9328175
04147 Exosome [BR:
aly04147
]
9328175
04090 CD molecules [BR:
aly04090
]
9328175
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9328175
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9328175
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9328175
CD molecules [BR:
aly04090
]
Proteins
9328175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
Zeta_toxin
AAA_21
AAA_16
AAA_15
ABC_ATPase
RsgA_GTPase
G-alpha
DUF815
nSTAND1
AAA_7
AAA_30
DLIC
Motif
Other DBs
NCBI-GeneID:
9328175
NCBI-ProteinID:
XP_020868942
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MNRDGAGEGDSVSYEPSTAKSSKEGEETKKEEKRDEKAKTVPFYKLFAFADSFDVFLMIC
GSIGAIGNGVCLPLMTLLFGDLIDSFGKNQNNKDIVDVVSKVCLKFVYLGLGRLGAAFLQ
VACWMITGERQAARIRSTYLKTILRQDIGFFDLETNTGEVVGRMSGDTVLIQDAMGEKVG
KFIQLVSTFVGGFVLAFIKGWLLTLVMLTSIPLLAMAGAAMALIVTRASSRGQAAYAKAA
TVVEQTIGSIRTVASFTGEKQAINSYKKFITSAYKSSIQQGFSTGLGLGVMFFVFFSSYA
LAIWFGGKMILEKGYTGGAVINVIIIVVAGSMSLGQTSPCVTAFSAGQAAAYKMFQTIKR
KPLIDAYDVNGKVLEDIRGDIELKDVHFSYPARPDEDIFNGFSLFIPSGATAALVGESGS
GKSTVISLIERFYDPKSGAVLIDGVDLKEFQLKWIRSKIGLVSQEPVLFSSSIMENIAYG
KENATLQEIKAVTELTNAAKFIDNLPQGLDTLVGEHGTQLSGGQKQRIAIARAILKDPQI
LLLDEATSALDAESERVVQEALDRVMVNRTTLIIAHRLSTVRNADMIAVIHRGKMVEKGS
HSKLLKDSEGAYSQLIRLQEINKGNDVKPSDVSAGSSFRNSSLKKSIEGSVISGGTSSVG
NSSRHHSLNVLGLFAGLDLGSGSQRVGQEETGTASQEPLPKVSLTRIAVLNKPEIPVLLL
GTVAAAINGAIFPLFGILISRVIEAFFKPVDQLKKESRFWAIIFVALGVTSLIVSPSQMY
LFAVAGGKLIRRIQSMCFEKAVHMEVGWFDEPENSSGTMGARLSTDAALIRALVGDALSL
AVQNAASAASGLIIAFTASWELALIILLMIPLIGINGFLQVKFMKGFSADAKSKYEEASQ
VANDAVGSIRTVASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGFSFFILFCFYAT
SFYAAARLVEDGRTTFIDVFQVFFALTMAAIGVSQSSTLAPDSSKAKAAAASIFAIIDRK
SKIDSSDESGTVLENIKGDIELRHLSFTYPARPDIQIFRDLCLTIHAGKTVALVGESGSG
KSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIRANIAYGK
GSEEAATESEIIAAAELANSHKFISSIQEGYDTVVGERGIQLSGGQKQRVAIARAIVKEP
SILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIAEK
GTHGTLIKIDGGVYASLVQLHMTASN
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgacggcgctggagaaggcgactctgtttcatacgaaccatcaacagctaaa
agttctaaagaaggagaagagacgaagaaagaggaaaaaagagatgaaaaggcgaagaca
gttcctttctacaagctatttgcgtttgcagattcctttgatgtgttcttgatgatatgt
ggctcaatcggagctattgggaatggtgtgtgtttacctcttatgacattgttgtttggt
gatctcatagattcctttggaaaaaatcagaacaacaaagacattgttgatgttgtctcg
aaggtttgtcttaaattcgtctaccttggacttggaagacttggagcagcctttcttcag
gttgcttgttggatgattacgggagagagacaagctgcaaggataagaagtacgtatctg
aaaacaattctgagacaagacattggattcttcgatttggaaactaacacaggagaggtt
gtcggtagaatgtctggagatactgttcttattcaagatgccatgggtgaaaaggttggg
aagtttattcagctggtatctactttcgttggcggatttgttttagctttcattaaagga
tggttactaacattggttatgttaacttccatccctcttctggctatggctggtgcagcc
atggcccttatcgtcactagagcttcttctcgaggacaagccgcttatgcaaaagcagca
actgttgttgaacagactatcggatctatccgaacggttgcttcgtttacgggagagaag
caagccattaacagctacaagaagttcataacatcggcgtataaatcaagcattcaacaa
ggtttctccaccggtttaggacttggagtaatgttcttcgtgtttttcagcagctatgct
ttggctatttggtttggtgggaagatgatactcgaaaaagggtatactggtggcgctgtg
atcaacgtgatcatcattgtggttgcgggttcaatgtcccttgggcaaacatctccatgt
gtaaccgcattttcagctggtcaagctgcagcatataagatgtttcagacgatcaaacga
aagcctttgattgatgcttatgacgttaatggaaaggttcttgaagatatccgaggagac
attgaacttaaagatgtgcatttcagttaccctgcgaggccagacgaggatatattcaac
ggattctctctgtttattcccagcggtgcaacagcagcattagtaggagaaagtggaagt
ggaaaatctaccgtgatcagtttgattgagaggttttatgatccaaaatccggcgcagta
ctaattgatggagttgatcttaaggagtttcagttgaaatggatcagaagcaaaatcgga
ttggtcagtcaagagccggttctgttttcgtcgagcatcatggagaatatcgcctatgga
aaagaaaatgcgacgcttcaagagattaaagctgtaacagagctaactaatgcggcgaag
ttcatagataacttacctcaggggttggatacattggtaggagagcacgggacacagctc
tcgggaggacagaaacagaggatagcgattgcgagagctattcttaaagatccgcagatt
ttgctgctggatgaagcaacaagcgcgctcgatgcagaatccgaaagagttgttcaagag
gctttagatagagtgatggttaaccggactacgctgattattgcgcataggttaagcacg
gtaagaaatgcggatatgattgcagtaattcaccgcggaaaaatggtggaaaaaggttca
cattccaagttgttgaaagattccgagggagcttattcacagctcattcggttacaagag
ataaacaagggtaacgatgtgaaaccatcagacgtatctgcgggatcatctttccggaac
tcgagtttgaaaaaatcaatagagggatcggttatcagtggcggaacctcgtcggttgga
aatagcagccgtcatcattctttgaatgttcttggtttatttgcaggactagacctcggt
agcggtagccaacgagtaggtcaagaggaaactggaacggcaagtcaagaaccgctccca
aaagtatcactcacccgaattgcggttctaaacaaacctgagatccctgttctcctttta
ggaactgtagcagcagcaattaatggcgcaattttcccgcttttcgggattctgatttca
agagtcattgaagcgttcttcaaaccagttgaccaactaaagaaagaatcaagattctgg
gctattatatttgtagctctgggagtaacttcgttgattgtctcaccgtctcaaatgtat
ctgtttgcagtagctggaggaaaactaattcgacgaattcagtcaatgtgctttgagaaa
gcggttcacatggaagttgggtggttcgatgagccagagaactcgagtggtacaatgggg
gccaggctctcgactgatgcagctttgattagagctctagttggtgatgcattgtctcta
gcggttcaaaatgctgcatctgctgcgtctggattgattatagcgttcactgcgagttgg
gaactggcgcttataatattattgatgattcctcttattggtatcaatggcttccttcaa
gtcaagtttatgaaaggattcagcgccgacgcaaagtcaaagtatgaggaggcgagtcag
gtagcgaatgatgcggtaggtagtataagaacagttgcttctttctgcgcggaggaaaaa
gtgatgcagatgtataagaagcaatgcgaaggtccgataaaagatggaatcaagcaaggt
ttcatcagcggattagggtttggattctctttcttcattctgttttgtttctacgcgaca
agcttctacgcggcggctagattggttgaagatggcaggactactttcattgatgttttc
caggtgttctttgcgttaacaatggcagcgattggggtttctcagtcgagtacattagct
ccagattcgagcaaagccaaggctgcagctgcttcgatctttgcaatcatcgatagaaaa
tcgaagatagactcgagcgatgagtcagggacagtgttggagaacattaagggagatatt
gagcttcgtcacttaagcttcacttatccagcaagaccagacattcagatctttcgtgat
ctttgcttaaccattcatgcaggaaagacggttgctttggtaggagaaagcgggtcgggg
aaatcgacggtgatctcgctgttacaaagattttacgatccagattctggtcatataact
ttagacggagttgagctcaaaaagctgcaattgaaatggttgagacaacaaatgggacta
gtgggacaagaaccggtcttgttcaacgacacgattcgagccaatattgcttatggcaaa
ggaagcgaagaggccgcaaccgagtctgaaatcatagccgctgcagaactcgccaattca
cacaaatttatctctagcatacaagagggttacgatacagtcgtgggagaaagagggatt
cagttgtcaggaggacagaaacagcgtgtggctatagcacgcgccatcgtgaaagagccg
agtattttgcttttggacgaagcaacaagcgctcttgatgcagaatcagagcgagtggtt
caggatgcgcttgaccgagtgatggtgaaccgaaccacggttgtggtggctcaccggtta
tcgaccattaaaaacgctgacgtcattgccgtcgttaagaatggtgtgatcgctgagaaa
gggactcacgggactttgatcaaaatcgacggtggggtttatgcctcgctagttcagcta
cacatgactgcttctaattga
DBGET
integrated database retrieval system
