KEGG   Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_496924Help
Entry
ARALYDRAFT_496924 CDS       T01578                                 

Gene name
SDH1-1
Definition
(RefSeq) succinate dehydrogenase 1-1
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00020  Citrate cycle (TCA cycle)
aly00190  Oxidative phosphorylation
aly01100  Metabolic pathways
aly01110  Biosynthesis of secondary metabolites
aly01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    ARALYDRAFT_496924 (SDH1-1)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    ARALYDRAFT_496924 (SDH1-1)
Enzymes [BR:aly01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     ARALYDRAFT_496924 (SDH1-1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA FAD_binding_3 DAO HI0933_like
Motif
Other DBs
NCBI-GeneID: 9302813
NCBI-ProteinID: XP_002866741
UniProt: D7MLY6
LinkDB All DBs
Position
Unknown
AA seq 634 aa AA seqDB search
MWRCVSRGFRAPSSKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGA
GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDW
LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA
ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMASDGSCQGVIALNMEDGTLHRFRSSQ
TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS
RGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHLNHL
PPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDNPDA
VVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPGEKQKPLEKDAGE
KTIAWLDRLRNSNGSLPTSSIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFGDVQ
VKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTL
GYWEDEKVRLEYRPVHMDTLDDEIDTFPPKARVY
NT seq 1905 nt NT seq  +upstreamnt  +downstreamnt
atgtggcgctgcgtctctcgtggctttcgagctccttcttcaaagacctcttcactcttt
gatggcgtctctggatctcgcttttccagattcttctccaccggttctaccgatacgaga
tcctcttatacgatagttgatcacacctatgatgcggttgtggtgggagctggtggtgct
ggacttagggcggcgattggtttatcggagcatggatttaacaccgcttgcattactaag
cttttccccacaaggtcacatactgttgctgctcagggtggtattaatgctgcactggga
aatatgtccgaagatgactggagatggcacatgtatgacactgtcaaaggaagtgactgg
ctaggtgatcaagatgctatccagtatatgtgtagagaggcaccaaaagcagtcattgaa
cttgagaattatgggctgcctttctctcgtactgaagaagggaaaatttaccagcgtgca
tttggtggtcagagtcttgactttggaaaaggtggtcaggcctatcgttgtgcttgtgct
gctgatcggactgggcatgctctgttgcatactctctatggacaagctatgaagcacaac
actcagttctttgttgaatacttcgccttggatttgcttatggctagtgatggcagttgc
cagggtgtaattgcactaaacatggaagatggaacattgcatcgtttccgctcttcacaa
acaattttggcaactggggggtacggcagagcatacttctctgcaacctcagcacataca
tgcacaggagatggaaatgccatggttgcacgggccggtcttccattgcaggacttagag
tttgttcagttccatccaactggtatatatggggctggatgtctcatcactgaaggatct
cgaggtgaaggaggtatccttagaaacagtgaaggtgaacgttttatggagcgatatgct
cctacagccaaggatcttgcatcaagagatgttgtctccagatccatgactatggaaatc
agggaaggtcgtggtgtaggaccgcataaggatcatatctatctccatctgaatcatctt
cctccagaagttctgaaagaaaggcttcctggaatctctgagaccgctgccatctttgct
ggtgttgatgttaccaaagagccaattcccgtcttacccacggttcattataacatgggt
ggtatcccaacaaactaccatggcgaggtagttaccatcaaaggcgataatccagatgca
gtggtacctgggctaatggctgctggagaggcagcttgtgcatctgttcatggtgccaac
aggcttggtgcaaattcattgctcgacattgtcgtctttggtcgtgcttgtgcaaatagg
gttgcggagataagcaaaccaggggagaaacagaaacctcttgagaaggatgcgggtgag
aagactattgcatggctggacaggttgagaaactcaaatgggtcgcttcctacctcaagt
atcagattgaacatgcagagagttatgcagaacaacgcagctgtgttccgcacgcaagaa
acattggaagaaggttgtcagttgattgacaaggcctgggaaagttttggggatgtccag
gtgaaagatcggagtatgatatggaactctgatttgatagagacgttggagctggagaac
cttctgataaacgcttcgataacaatgcattcagcggaagcacgaaaggaaagtagagga
gcacatgctcgggaagacttcacgaaaagagaggatggagaatggatgaagcatacattg
ggatattgggaagatgagaaagtgagattggagtataggcctgttcacatggacactctc
gacgatgagatcgacactttccctcccaaagctcgtgtctattga

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