Alteromonas sp. Mac2: AV940_05470
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Entry
AV940_05470 CDS
T05899
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
alz
Alteromonas sp. Mac2
Pathway
alz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AV940_05470 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_05470 (uvrC)
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV940_05470 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
HHH
GIY-YIG
HHH_5
HHH_2
HHH_3
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AMJ89963
LinkDB
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Position
complement(1335466..1337283)
Genome browser
AA seq
605 aa
AA seq
DB search
MSAFDSAAFLKNLTSQPGVYRMYNAQEEVIYVGKAKNLKKRVSSYFRMNVDNAKTRSLVM
QIANMDVTVVNSETEAFLLENNFIKKYKPRYNVVMRDDKSYPFIFLSDHQHPRLSFHRGP
QKKKGEYFGPYPSAGAVRESLRSMQRIFPVRQCEDSYYRARSRPCLQYQMQRCSAPCVEG
YVSDEEYNEQIDLARLFLKGKNQQVIGTLVDKMEKASEALNFEAAARYRDQINTLRKVQE
RQWVAGTQDEMDVFGFAVKGNMACIQVMFIRDSQLLGSKAFFPKVPNTADEQEIFESFLL
QFYLAGNKLIPKQMVFASALSDEEAIADLLSGEAGYRVNFFKGAREEKRRYLELAQANAE
TALEAQYGEQKSVFARYLDLETALELDVPLQRMECFDISHTSGEQTVASCVVFNREGPLK
SDYRRYNIEGITPGDDYAAMAQALKRRYKSVKEVQKIPDLLLIDGGKGQLSQAETFFEDW
PHDKKPMLLGVAKGTTRKPGLETIILADSHDTVPMDSHSPALHLIQHIRDESHRFAITGH
RNRRQKVKTTSSLETIPGVGAKRRQTLLKYMGGLQGLKKASKDEIASVPGISKELADTIY
DHLHL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgattccgcagcgtttctcaagaatttaacttctcagcctggcgtatac
agaatgtataacgcccaggaagaagtgatttatgtaggtaaagcaaagaaccttaaaaaa
cgtgtttccagctattttcgaatgaatgtcgataatgcgaaaacacgctcattggtaatg
caaattgccaatatggatgtcactgttgtaaacagcgagacagaagcgtttttgctagaa
aacaacttcattaagaagtacaagccgcgttataacgtggtcatgcgtgacgataaatcc
tatccctttatattcctatctgatcaccaacacccacgcctgtcgtttcaccgtggtccc
caaaagaaaaagggggaatacttcggtccttatcctagtgcgggtgcagttcgggaaagt
ttgcgttctatgcagcgtatttttccagtacgtcagtgtgaagacagttactatcgcgca
agaagtcgcccctgtttgcaataccaaatgcaacgctgcagtgcgccttgtgttgaaggt
tacgttagcgacgaagaatataacgagcagatagacctcgccaggctattccttaaaggt
aaaaatcaacaagttattggtaccttggtggataaaatggaaaaggccagtgaagcatta
aactttgaagcggcagcccgttatcgcgaccaaattaatacacttcgcaaagtacaagag
cgccaatgggtagccggtacgcaagacgaaatggatgtgtttggttttgcagtaaaaggc
aatatggcgtgtatacaggtgatgtttatccgtgacagccagcttttgggcagcaaagcg
tttttccctaaagtaccgaatacggctgatgagcaagaaattttcgaatccttcttattg
cagttttatttagcgggcaacaaacttatacctaaacaaatggtatttgccagtgcgttg
tctgatgaagaagccattgccgatttacttagcggtgaagctggctaccgtgtgaatttc
ttcaaaggagcacgtgaagagaaacgtcgctacctagagttggcgcaggccaacgcagaa
actgcattagaagcccagtacggcgaacaaaaatcagtgtttgcccgttatcttgattta
gaaacggcgcttgaattagatgtaccattgcagcgtatggagtgtttcgatataagccat
acctccggcgaacaaacggtggcatcctgcgtggtgtttaatcgtgaagggccacttaaa
agcgattaccgtcgttataatattgaaggtattacgcctggcgacgactacgctgccatg
gcacaagcccttaagcgtcgttataaatcggttaaagaagtacaaaagatcccagatttg
ctgcttattgatggcggcaaaggccagttgtctcaggccgaaacgtttttcgaagattgg
cctcatgataaaaagcctatgttattaggggtggcgaaaggcaccacccgtaagccaggg
ttagaaactattatattggccgatagccacgacacagtgcctatggatagccactcaccc
gcattgcatcttattcagcatattagagatgaatctcaccgctttgctattacagggcat
agaaaccgccgccaaaaggttaaaaccacttcaagtttagaaaccatacctggggtaggg
gctaaacgtcggcaaacattgttgaaatacatgggcgggctgcaagggcttaaaaaggcc
agtaaggacgaaattgccagcgtaccaggtattagcaaagagttagctgacaccatatat
gaccatcttcatctttaa
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