KEGG   Alteromonas mediterranea DE1: amad1_02505
Entry
amad1_02505       CDS       T02340                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amaa03019]
    amad1_02505
   03009 Ribosome biogenesis [BR:amaa03009]
    amad1_02505
Messenger RNA biogenesis [BR:amaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     amad1_02505
Ribosome biogenesis [BR:amaa03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    amad1_02505
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AFV84031
LinkDB
Position
557505..558050
AA seq 181 aa
MSKHDSNLVWIDMEMTGLDPETCVVMEIATIVTDAQLNILAEGPVIAVHQSDDVLNNMDE
WCTRVHGESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCGNTIGQDRRFMVKYM
PELEAYFHYRNIDVSTIKELTRRWKPEVLDGFEKKGVHLALDDIRESIEEMRYYREKVFT
I
NT seq 546 nt   +upstreamnt  +downstreamnt
atgagtaaacacgacagtaaccttgtttggatagacatggaaatgacagggttagatcct
gaaacctgcgtagttatggaaattgccaccatagttaccgatgcacagcttaatattttg
gctgaaggccccgtaatagcggtacatcaaagtgatgacgtgttaaacaacatggacgag
tggtgcacacgcgttcacggagaaagtgggcttactgcgcgttgccgagagagtaaaata
agcgtagaagaagcatccgcacagactattgcctttttagagcagtgggtagatgcaggt
aaatcaccactgtgtggaaacaccattgggcaagacagacgattcatggttaagtacatg
cccgagcttgaagcttacttccactatagaaatattgatgtaagtacaataaaagagcta
acgcgccgctggaagcctgaagttttagatggtttcgaaaagaaaggcgtacacttagcc
ttagatgatattcgcgagtctattgaagaaatgcgctattatcgagagaaagtgtttacg
atttaa

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