Alteromonas mediterranea DE1: amad1_12770
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Entry
amad1_12770 CDS
T02340
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amaa01002
]
amad1_12770
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amaa01011
]
amad1_12770
Peptidases and inhibitors [BR:
amaa01002
]
Cysteine peptidases
Family C82
amad1_12770
Peptidoglycan biosynthesis and degradation proteins [BR:
amaa01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
amad1_12770
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFV86054
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Position
complement(2867446..2868834)
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AA seq
462 aa
AA seq
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METEHRAVKHTDQLLHSNQLEVNASGRFLAPKKRTSSIAKKLIIAAASFWLPLVGVASTV
STSSPKALEQTSNNSVLQTQLKQMKSAYAFYSSIAQQGGWEALNEDLLLKHGALRKASAD
ATPIYSEEEAQAVSALVARLGREYTSIDTNCTYALTATHSKPCVFDKDVENAVRDFQRRH
GLLVDGVVGKKTLAALNVSADEKAQQLALNITRLEMFEEKDSDAYVLVNIPEFRLRYISK
GRVKATKDVVVGKPSWATPSFSDHIEKFVVNPEWRIPLSIATKEIAPKVADNPHYLEENN
IVIRRNSFVDDELVDPNTIDWENMKPYQFDHFLVKLPNEKNPLGKVKYLFPNRHAVYVHD
TPYQQWFKETNRAASHGCIRLEDPFSLAQLIAEEQGVDSLMDNVISARELSQSKTFHLEE
PLPIHLVYWTAWADENGKANFRNDIYQRDRRDAEALTQVASL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgaacatcgagccgtcaagcatactgatcaattgctccatagtaatcaatta
gaagtgaacgcttctggtcgctttttagcgcctaaaaagcgaacttctagcatagcgaaa
aaactcattattgctgctgcatctttctggttacccttggttggtgttgcctcgaccgtt
tctacttcctcgccaaaagcattagaacagacaagtaacaactctgttttgcagacacag
ttaaagcaaatgaaaagtgcctatgctttttattcttctatagctcagcaaggtggttgg
gaagcattaaacgaagacttgcttcttaagcatggtgcattgagaaaggcttcagcagat
gcaacacctatctacagtgaagaggaagctcaagctgtaagtgcattagtcgctcgttta
ggcagagaatacacctcgatagatacaaattgtacttatgcattaacagcgactcactcc
aagccatgcgttttcgataaagatgtcgaaaatgcagtaagagattttcaacgccgtcat
ggccttctagtagatggtgtagtaggcaaaaagacgcttgctgcattaaatgtgtcggca
gatgagaaagcccagcaattagcactgaatataacacgcttggaaatgttcgaagaaaaa
gacagcgatgcttacgtgttagttaacattccagaattccgccttcgttatattagtaaa
ggtagagtaaaagccactaaagacgtggtagtaggcaagccaagttgggctacgccttct
tttagcgatcatatcgaaaaatttgtcgtgaacccagaatggcgtataccactttcgata
gcgactaaagagatcgccccgaaagtagcagacaaccctcactacttagaagaaaacaac
attgttattcgtagaaatagctttgttgatgatgagttggttgaccccaatacaatcgat
tgggaaaacatgaagccttatcagttcgaccattttttagtaaagctccccaacgaaaaa
aatccgttaggcaaggttaaatacctttttccaaaccgacacgctgtatacgtgcacgat
accccttatcagcaatggttcaaagaaacgaacagagccgcctctcacggttgcattcga
ttagaagaccctttttctttagcccaacttatagcggaagagcagggcgtagatagctta
atggataatgttatttcggctcgcgagctaagtcagtctaaaacctttcaccttgaagag
cctttgcctattcatttggtgtactggaccgcgtgggccgatgaaaacggtaaggctaac
tttagaaacgatatttatcagcgcgatagacgcgatgccgaagcgctaacgcaggtagcg
tctttgtga
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