KEGG   Alteromonas mediterranea DE1: amad1_18225
Entry
amad1_18225       CDS       T02340                                 
Name
(GenBank) toxin secretion ABC transporter ATP-binding subunit/permease
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
amaa  Alteromonas mediterranea DE1
Pathway
amaa02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    amad1_18225
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:amaa01002]
    amad1_18225
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:amaa02000]
    amad1_18225
   02044 Secretion system [BR:amaa02044]
    amad1_18225
Peptidases and inhibitors [BR:amaa01002]
 Cysteine peptidases
  Family C39
   amad1_18225
Transporters [BR:amaa02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    amad1_18225
Secretion system [BR:amaa02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   amad1_18225
SSDB
Motif
Pfam: Peptidase_C39 ABC_membrane ABC_tran SMC_N Peptidase_C70 AAA_29 AAA_22 AAA_21 RsgA_GTPase AAA_23 AAA_16 AAA_30 nSTAND1 Guanylate_cyc_2 NACHT PhoH nSTAND3 MMR_HSR1 Peptidase_C39_2 TsaE NB-ARC dCMP_cyt_deam_2 ABC_ATPase SbcC_Walker_B Dynamin_N
Other DBs
NCBI-ProteinID: AFV87124
LinkDB
Position
4134281..4136455
AA seq 724 aa
MMMSMTMPHVSHTLTTKKRVPVILQSEAAECGLACMAMIAQYYRDKRDLNALRQSMSVSL
RGTTLKDVMKIASDMGFQTRAIKIELSHITQLTCPAILHWNMNHFVVLTKVKGDRITIHD
PALGERRLSYAEASKCITGIALEVSPSDSFSPIKAGPRLGLTQFFTRTTGFKRNLLTLFA
LSLVLQLFALAAPYYMQTVVDDVLIYNNNALLKALAIGFALLLMLETFTSGVRKLVILSV
SSRLQLQMSASVFKHLLSLPLDYFDKRHIGDVVSRFGSLASIREFLATGVVTALLDGLMA
VVTLAVMMVYSVKLSLVVVAIMATYLAIRLGLLPLIKRLTTERIALAASEQSHFMESVRA
ILPIRVYGQETQRHGQWQNKLVATLNKDITLGKINIGSTLTNQFLFGAENLIVVYIGASL
VMESTLSIGMLLAFIAYKSRFVSALDGVVNKLVELNMLGVHFSRLSDIVLTPVQVKPHRY
QNADLPYYANQSLPNNTAIALETKSLGYRYSESSEWIFKDLALTVKSGDIVAIVGESGSG
KSTLLKCLMGLYPVSEGKVERPSVKQPVVASVLQDDACLSGTIAQNICCFEQAPDLQKMV
HVAHIACIHEDIMHMPMQYHTLVGDMGSSLSGGQKQRLLLARALYQEPDILFLDEASSHL
DMANEARINQHLTSLNMTRIIVAHRPQSIAMADKVYRLANGTLHPCSPTEVSGSAISGNH
GETR
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgatgatgagtatgacaatgccccacgttagccacaccctgaccactaaaaaacgcgtg
cctgtcatcttacaaagtgaggcggctgagtgcggacttgcctgtatggctatgattgcc
cagtactatagagataaacgggatctcaacgccctacgccaatctatgtcagtgtcgttg
cgtggcaccacattaaaagatgtaatgaaaattgcgagtgatatgggctttcaaacccgg
gcaataaagatagagctttcccatatcacgcaacttacctgccctgccatcttacattgg
aatatgaaccactttgttgtgctgacgaaagtgaaaggtgaccgtatcacaatacatgac
ccggcacttggcgaaagaaggctgtcctatgcagaagcgtctaaatgcattaccggcatt
gcgcttgaggtatcacctagcgacagctttagcccaatcaaagctggcccgcggcttggc
cttacccagtttttcacacgtaccacagggtttaaacgcaaccttcttacgctattcgcc
ttatccctggtgctgcagttattcgccctcgctgcgccttattacatgcaaaccgtggta
gacgatgtacttatctacaataacaacgccctactcaaagcgctcgctattggctttgcc
ctattactgatgctagaaacctttactagcggggtaagaaagctggttattttgtcggtg
tcatcgcggcttcaacttcaaatgtcggcgtcagtattcaaacatttgctgtcacttcct
ctcgactacttcgacaagcgccacattggcgacgtggtatctcgatttggctcactggca
agcattagagagtttttagccaccggcgtggtaacggctttattagatgggctaatggcc
gtcgtcaccttagcggtaatgatggtttattcggtgaagctctccctcgtcgtagtggca
atcatggccacatatttagccattcgcttagggctactcccccttattaaacgccttacc
acagagcgcattgcccttgcagcgtccgaacaaagtcacttcatggaaagcgtgcgggct
attttaccaattcgggtttacgggcaagagacacagcgtcacggacaatggcaaaacaaa
ctcgtggccactttaaacaaagacataacactgggtaaaatcaatattggcagcacgctg
actaatcagttcctgtttggcgcagaaaacctcattgtagtgtatatcggggctagctta
gtcatggaaagcaccctttccattggtatgctgctggcttttatcgcctataaatcacgt
tttgttagcgcactagatggtgtggttaataagttggtagagctcaatatgctgggcgtt
cacttttctcgtcttagcgatattgtactcacgccggtacaagtaaaacctcatcgttac
caaaatgctgacctaccctattacgcgaatcaatctctacctaataatacggccatcgcc
cttgaaactaaatcgctgggataccgatacagtgaatctagcgagtggatctttaaggac
ctcgcactcaccgtcaaatcaggtgatattgtagcaattgttggtgagagcggaagcggc
aaaagtaccctgcttaaatgcctaatggggctttacccggtatcagaaggcaaagttgaa
cgccccagcgttaagcagcctgttgtcgcatcggtcttgcaagacgatgcctgcttaagc
ggtaccatagcgcagaacatttgctgttttgagcaagcgccagacctacaaaaaatggtt
cacgtcgcacatatcgcctgcattcatgaagatatcatgcatatgcctatgcaataccac
accttagtaggcgatatgggaagcagtttaagcggtggccaaaaacagcgactgcttctc
gcccgagccctttatcaagagcccgatattctgtttctagatgaagcgagcagccacctg
gatatggccaacgaggctcgcattaatcagcatctaacatcactcaatatgacccgaatt
attgtggcccatcgcccacagtcaattgctatggcagataaagtttaccgcttggcaaac
gggacactacacccctgctctcctaccgaagtatcaggaagcgcaatatcaggtaaccac
ggagaaacacgatga

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