Alteromonas mediterranea DE1: amad1_22088
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Entry
amad1_22088 CDS
T02340
Name
(GenBank) Initiator RepB protein
Organism
amaa
Alteromonas mediterranea DE1
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Gene cluster
GFIT
Motif
Pfam:
Rep3_C
RepC
Motif
Other DBs
NCBI-ProteinID:
AFV87851
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Position
pAMDE1:complement(300420..301712)
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AA seq
430 aa
AA seq
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MKKIKESAKPVHLRKHVAAVHIGSVGFNLLHRKAINAAIWFAQQEAREIAGGDLESYLNK
TDGIEVNHSINFKEFRQYINYNSNDHEYLKNIFRDLSQLAVEFDLIEGRRSWEIMPFLSY
VKFANGMITWSFRSEIRRSILDPDVYAKINSEIVNQIQNDIAFALYENTYRYVNIGKTPW
LKINTLRQLLGIAKDAYKETKYFTRVLKQSMKQIQKVAGITLEMEPTGKPIKAVRFLVRA
NQQPDLLIEQHVVQEQSDVEAQLSHFGFTPNQIADIFNAYPLDYIQSKINFLNKRARAGG
IRNFAAFAYKAFEDDYVENTFTPKLSKTESMPALTAKNSRGDKMSFIEIFAVATPEEKDS
MKRLFESAFRASQPHSLNKREYDYAYNQLMNNDWSGAELKKSFEEYVEGYVFMRAAYSSE
IRSRLKSAAK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataaaagaaagcgccaaaccagtccatttaagaaaacacgtggccgcagta
catataggttctgttggtttcaatttgttacataggaaggctattaatgccgcaatttgg
tttgcgcaacaagaagctcgagaaatagctggtggtgacctggaaagctatctcaataaa
acagacggtattgaggtcaatcacagcatcaactttaaagagttccgtcaatatataaat
tacaactcaaatgatcatgagtatttaaaaaatatattccgtgatttatcacaactagct
gttgagtttgacctaatagaagggcgacgaagctgggagataatgccctttctatcatac
gtaaaatttgctaatggaatgatcacatggagttttagatctgagattagacgctctatt
ttagaccctgatgtttatgcaaaaatcaactctgaaatagtcaatcaaatacaaaatgat
attgcctttgcactttatgaaaatacttatcggtatgtaaatattgggaaaaccccatgg
cttaaaattaacaccttgagacaacttcttggaatagcaaaagatgcttataaagaaacc
aagtatttcacaagggttcttaagcaatctatgaaacaaattcaaaaggtcgctggtata
acacttgagatggagcctactggtaagcctattaaagctgttaggtttcttgtgagagct
aatcaacaacctgatttactaattgagcaacatgtagttcaagaacagtcagatgttgaa
gcacagctttctcattttggattcactcctaatcagatagctgatattttcaatgcttac
ccgctagattatattcagtcaaaaattaattttttgaacaaaagagcgcgagcaggcggt
attagaaattttgcagctttcgcctataaagcctttgaagatgattatgttgaaaatact
tttactccgaaattaagcaaaactgaatctatgcctgcactcacggcaaaaaattcaaga
ggagataagatgtcatttatagagatctttgccgttgccactcctgaagaaaaagatagt
atgaaaaggttattcgaaagcgcctttagggcaagccagcctcattcgcttaataaacgg
gaatatgattatgcttataatcagctaatgaataatgattggtctggagcagagctaaaa
aagtctttcgaggagtatgttgagggttatgtcttcatgagagccgcatatagctctgag
attagaagcagattaaagagtgctgctaaatag
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