KEGG   Alteromonas mediterranea U7: I876_03100
Entry
I876_03100        CDS       T02721                                 
Name
(GenBank) Pseudouridylate synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
amae  Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:amae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amae03016]
    I876_03100
Enzymes [BR:amae01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     I876_03100
Transfer RNA biogenesis [BR:amae03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    I876_03100
 Prokaryotic type
    I876_03100
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AGP88505
LinkDB
Position
complement(724355..725440)
AA seq 361 aa
MKPLNTDHWQYYYAKPVSTGIFKFQADDFQVVEDLGYSPCGEGEHQFVFVEKTNTNTAFV
AEQLARFVNLPLRQITYAGRKDKYAVTQQWFGIHAPGKPDFDFSNFELEGVKVLKQVRHN
KKLRTGQLKGNHFTITLRQVLHPEAIEARLQEIEKHGVPNYYGEQRFGVMRLNDMGEVQR
GGNLVMAERMVNGESIRHRNKRSMALSALRSWLFNEMLSTRLEQNKFDTVIEGDALVLTG
SNSFFINGGATNTDEQQDAQRRFDAKDVCPSAPLWGKGALVTQANALALEQAVAEQNSEV
IDFLSQCGFDQERRAIKIWPSQLEWQSKGDTFTISFALPSGCFATSVLRECVETLSPINR
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagccgttaaataccgaccattggcagtactattacgcaaagcccgtatcgaccggc
atctttaaattccaagccgacgactttcaagtagtcgaagacttaggctattcaccatgt
ggcgagggagagcaccaatttgtatttgttgaaaaaacgaatacaaataccgcgtttgtc
gcagagcagcttgcgcgctttgttaacctcccccttcgacaaattacctatgcagggcgt
aaggataaatacgccgtaacccaacagtggttcggcattcacgccccgggaaagcccgat
tttgactttagcaactttgaacttgaaggtgttaaagtactcaagcaagtacgccataac
aaaaagctacgaacaggccagctcaaaggtaaccacttcacaattacgcttaggcaagta
cttcaccctgaagccattgaagcgcgtcttcaggaaattgaaaagcatggagttccaaat
tattacggcgaacaacgctttggcgttatgcgattaaatgacatgggcgaagtgcagcgc
ggcggtaatttagttatggctgagcgtatggtgaacggtgagtccattaggcacagaaac
aagcgctctatggcgttatcggctttgcgaagctggctgtttaatgaaatgctctccact
cgccttgagcaaaacaagttcgatactgttattgaaggtgacgcgctagtactgactgga
tcaaacagttttttcattaatggcggcgccaccaacacagacgaacagcaagacgcccag
cgtcgatttgacgctaaagacgtatgcccatcagcaccgctttggggtaaaggtgcactt
gtgacccaagccaacgcactagcgctagaacaagcggtagcagaacaaaacagtgaagtg
atcgactttttaagccagtgcggtttcgatcaagagcgccgagcgataaaaatttggcca
tcacagcttgaatggcagagtaagggtgatacatttactatctcatttgcacttcctagt
ggctgctttgctacttcggtccttagggagtgtgtagagaccttgtctcccattaacagg
gtttaa

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