Alteromonas mediterranea U8: I634_00020
Help
Entry
I634_00020 CDS
T02722
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
amao
Alteromonas mediterranea U8
Brite
KEGG Orthology (KO) [BR:
amao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amao03032
]
I634_00020
03400 DNA repair and recombination proteins [BR:
amao03400
]
I634_00020
Enzymes [BR:
amao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I634_00020
DNA replication proteins [BR:
amao03032
]
Prokaryotic type
DNA Topoisomerases
I634_00020
DNA repair and recombination proteins [BR:
amao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I634_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
VAPB_antitox
Gp-FAR-1
5_3_exonuc
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AGP91756
LinkDB
All DBs
Position
4045..6465
Genome browser
AA seq
806 aa
AA seq
DB search
MSAENNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSE
IVVQIHSDGSVSVSDDGRGIPTELHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSSRLKLRIRRGGKAHEQEYQHGVPQAPLAATGDTDKTGTMIRFWPSSDTFTD
TLYHYDILAKRLRELSFLNSGVSIRLKDERDGKEDHFMYEGGIKAFVEYLNQKKTAVHQK
VFHFSSEQEDGIAVEVAMQWNDSFQENVFCFTNNIPQRDGGTHLAGFRGALTRTLNNYME
KEGLNKKAKTNASGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVRPAVESAMNEKLA
EFLLENPAESKIIAGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
GRDEYDPEKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYVYIAQPPLYKVK
KGKQEQYLKDDDALTNYLTGIAIDGASLHTSDEDPGISGVGLENLVKQYQSVEKMIARMK
RKMPSAILYRMLYTPTLNLEDLKDEAALEHVAKHFVEQLTERENDGATYRYEIRTDAELS
EYYITIIMRMHGIDYEYIIDHEFIESSEYQRLKELNLAINDMMGVDAYIKRGERKQPVES
FKDALEWLMNEAKRGQYIQRYKGLGEMNPEQLWETTMDPEGRRMLQVTIEDAIGCDQLFT
TLMGDQVEPRREFIEANALKVENLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagagaacaactacgactcgtccagtattaaagtacttaaaggattagatgcc
gtaagaaagcgtcctggtatgtatatcggtgatactgatgatggtaccgggttacaccac
atggttttcgaggtggtcgataactctatcgatgaagcacttgctggacattgttctgag
attgttgtgcagattcacagcgatggctcagtatctgtgtctgacgatggtcgcggtatt
cctacagagttgcaccctgaagagggcgtatctgcagctgaagttatcatgacggtgctt
cacgcaggcggtaagtttgatgataactcatataaagtatcaggtggtcttcacggcgta
ggtgtttcagtagtgaacgcactttcaagccgattgaagcttcgtattcgccgtggtgga
aaggctcatgaacaagaataccaacacggtgttccacaagcgccactagcggctactggt
gatactgataaaaccggaaccatgattcgcttctggccaagttctgatacctttaccgat
acgctttatcattatgatattttagctaagcgtcttcgtgagttgtcgtttttgaactct
ggcgtttctattcgtttaaaagacgaacgtgatggtaaagaagaccacttcatgtatgaa
ggcggtatcaaggcattcgttgaatatttgaatcaaaagaaaactgctgttcatcaaaaa
gtattccactttagcagtgagcaggaggatggcattgcagtagaagtcgcaatgcagtgg
aacgatagcttccaagaaaacgtgttttgcttcactaacaacattccacaacgagacggc
ggaacgcatttagcgggcttccgtggtgcgcttacacgtacattaaataactatatggaa
aaggaagggctgaataaaaaagccaagaccaatgccagtggtgacgatgctcgtgaaggg
ttaactgccgttatttccgtaaaagtacctgacccgaaattcagctcacagacaaaagat
aagttggtttcttctgaggtacgccctgctgttgaatcggcaatgaacgaaaagcttgct
gagtttctattagaaaacccagcggaaagtaagatcattgcgggtaaaattatcgatgct
gctcgcgcgcgtgaagctgcccgtaaagctcgtgaaatgacacgtcgtaagggcgcacta
gacttagctggtctaccgggcaagcttgctgattgtcaggagaaagatcctgcactaagt
gaactgtacatagtggagggtgactctgcgggcggttcagctaagcagggtcgtaatcgt
aagaaccaagctattttgccgcttaaaggcaaaattcttaacgtagagaaagcacgtttc
gacaagatgctttcttcgcaagaagttgcaacgcttatcacagcactaggttgtggtatt
ggccgtgacgaatatgacccagagaaactacgctatcacagcatcatcattatgaccgat
gctgacgttgatggctcgcatatccgtacacttctacttacgttcttctaccgtcaaatg
ccagagattattgaacgtggctacgtctatatcgcacagccaccgctttataaagtgaag
aaaggtaagcaagagcagtatctaaaagacgacgatgctttgactaattacctaacaggt
attgcaattgatggcgcatctttgcacaccagtgatgaggacccaggcatcagtggtgta
gggctagaaaacctagttaagcaatatcagtcagtagagaaaatgattgcgcgtatgaag
cgcaagatgccttcagcaattctttaccgtatgctgtacacgcctacgctaaatctagaa
gacttaaaagacgaagcggctctagagcacgtagcaaaacacttcgttgaacagttaaca
gaacgtgaaaatgatggtgctacataccgttatgaaattcgtactgatgctgagctgagc
gaatactacatcacgatcatcatgcgtatgcacggtatcgattatgagtatattatcgac
catgaattcattgagtcgtctgagtaccagcgtctgaaagagcttaacttagctattaat
gacatgatgggggtagacgcttacattaagcgtggtgaacgtaaacagccagtagagtct
ttcaaagacgctttagagtggttaatgaatgaagcaaaacgtggtcaatacattcagcgc
tataaagggttaggcgagatgaacccggagcagctttgggaaacgacgatggacccagaa
ggtcgccgcatgcttcaagttaccattgaagatgccattggttgtgaccagctgtttaca
acgttaatgggcgaccaagtagagcctcgtagagagtttatcgaagcaaatgcgttaaag
gtagaaaacctagacgtgtag
DBGET
integrated database retrieval system
